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Zinc in PDB 1wwf: uc(Nmr) Structure Determined For Mlv Nc Complex with Rna Sequence Ccuccgu

Zinc Binding Sites:

The binding sites of Zinc atom in the uc(Nmr) Structure Determined For Mlv Nc Complex with Rna Sequence Ccuccgu (pdb code 1wwf). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the uc(Nmr) Structure Determined For Mlv Nc Complex with Rna Sequence Ccuccgu, PDB code: 1wwf:

Zinc binding site 1 out of 1 in 1wwf

Go back to Zinc Binding Sites List in 1wwf
Zinc binding site 1 out of 1 in the uc(Nmr) Structure Determined For Mlv Nc Complex with Rna Sequence Ccuccgu


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of uc(Nmr) Structure Determined For Mlv Nc Complex with Rna Sequence Ccuccgu within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn57

b:0.0
occ:1.00
NE2 A:HIS34 2.0 0.0 1.0
SG A:CYS39 2.3 0.0 1.0
SG A:CYS29 2.3 0.0 1.0
SG A:CYS26 2.3 0.0 1.0
H A:CYS29 2.8 0.0 1.0
HB2 A:CYS39 3.0 0.0 1.0
CD2 A:HIS34 3.0 0.0 1.0
CE1 A:HIS34 3.0 0.0 1.0
HD2 A:PRO40 3.0 0.0 1.0
HA A:CYS39 3.0 0.0 1.0
HB3 A:TYR28 3.1 0.0 1.0
CB A:CYS39 3.1 0.0 1.0
CB A:CYS26 3.1 0.0 1.0
HB3 A:GLU31 3.1 0.0 1.0
HB3 A:CYS26 3.2 0.0 1.0
HB2 A:CYS26 3.2 0.0 1.0
HD2 A:HIS34 3.2 0.0 1.0
HE1 A:HIS34 3.3 0.0 1.0
HB3 A:CYS29 3.5 0.0 1.0
CB A:CYS29 3.5 0.0 1.0
H A:GLU31 3.6 0.0 1.0
CA A:CYS39 3.6 0.0 1.0
N A:CYS29 3.7 0.0 1.0
HA A:ALA36 3.9 0.0 1.0
CD A:PRO40 3.9 0.0 1.0
HD3 A:PRO40 3.9 0.0 1.0
H A:LYS30 4.1 0.0 1.0
HB3 A:CYS39 4.1 0.0 1.0
ND1 A:HIS34 4.1 0.0 1.0
CB A:GLU31 4.1 0.0 1.0
CG A:HIS34 4.1 0.0 1.0
HD2 A:TYR28 4.1 0.0 1.0
CB A:TYR28 4.1 0.0 1.0
HB2 A:GLU31 4.2 0.0 1.0
CA A:CYS29 4.2 0.0 1.0
H A:TYR28 4.2 0.0 1.0
H A:LYS41 4.3 0.0 1.0
HB2 A:CYS29 4.4 0.0 1.0
HB2 A:TYR28 4.4 0.0 1.0
N A:GLU31 4.5 0.0 1.0
C A:CYS39 4.5 0.0 1.0
CA A:CYS26 4.6 0.0 1.0
N A:PRO40 4.6 0.0 1.0
HB3 A:LYS41 4.6 0.0 1.0
N A:LYS30 4.6 0.0 1.0
HB2 A:LYS41 4.7 0.0 1.0
N A:CYS39 4.7 0.0 1.0
O A:TRP35 4.7 0.0 1.0
C A:TYR28 4.8 0.0 1.0
C A:CYS29 4.8 0.0 1.0
CA A:GLU31 4.9 0.0 1.0
HA A:CYS26 4.9 0.0 1.0
CD2 A:TYR28 4.9 0.0 1.0
CA A:ALA36 4.9 0.0 1.0
CA A:TYR28 4.9 0.0 1.0
HG2 A:GLU31 4.9 0.0 1.0
N A:TYR28 5.0 0.0 1.0
H A:CYS39 5.0 0.0 1.0

Reference:

A.Dey, D.York, A.Smalls-Mantey, M.F.Summers. Composition and Sequence-Dependent Binding of Rna to the Nucleocapsid Protein of Moloney Murine Leukemia Virus(,) Biochemistry V. 44 3735 2005.
ISSN: ISSN 0006-2960
PubMed: 15751950
DOI: 10.1021/BI047639Q
Page generated: Wed Dec 16 03:10:43 2020

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