Zinc in PDB 1wfl: Solution Structure of the Zf-AN1 Domain From Mouse Zinc Finger Protein 216
Zinc Binding Sites:
The binding sites of Zinc atom in the Solution Structure of the Zf-AN1 Domain From Mouse Zinc Finger Protein 216
(pdb code 1wfl). This binding sites where shown within
5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the
Solution Structure of the Zf-AN1 Domain From Mouse Zinc Finger Protein 216, PDB code: 1wfl:
Jump to Zinc binding site number:
1;
2;
Zinc binding site 1 out
of 2 in 1wfl
Go back to
Zinc Binding Sites List in 1wfl
Zinc binding site 1 out
of 2 in the Solution Structure of the Zf-AN1 Domain From Mouse Zinc Finger Protein 216
Mono view
Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 1 of Solution Structure of the Zf-AN1 Domain From Mouse Zinc Finger Protein 216 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Zn201
b:0.0
occ:1.00
|
SG
|
A:CYS49
|
2.3
|
0.0
|
1.0
|
ND1
|
A:HIS52
|
2.3
|
0.0
|
1.0
|
SG
|
A:CYS31
|
2.3
|
0.0
|
1.0
|
SG
|
A:CYS28
|
2.3
|
0.0
|
1.0
|
H
|
A:CYS49
|
2.8
|
0.0
|
1.0
|
HE1
|
A:HIS52
|
2.9
|
0.0
|
1.0
|
CE1
|
A:HIS52
|
3.0
|
0.0
|
1.0
|
HB2
|
A:CYS28
|
3.1
|
0.0
|
1.0
|
CB
|
A:CYS28
|
3.2
|
0.0
|
1.0
|
HB3
|
A:CYS31
|
3.3
|
0.0
|
1.0
|
H
|
A:CYS31
|
3.3
|
0.0
|
1.0
|
HB3
|
A:CYS28
|
3.4
|
0.0
|
1.0
|
HB3
|
A:CYS49
|
3.5
|
0.0
|
1.0
|
CB
|
A:CYS31
|
3.5
|
0.0
|
1.0
|
HB2
|
A:HIS52
|
3.5
|
0.0
|
1.0
|
CB
|
A:CYS49
|
3.5
|
0.0
|
1.0
|
CG
|
A:HIS52
|
3.5
|
0.0
|
1.0
|
N
|
A:CYS49
|
3.7
|
0.0
|
1.0
|
HB2
|
A:LEU51
|
3.8
|
0.0
|
1.0
|
HB3
|
A:MET30
|
3.9
|
0.0
|
1.0
|
N
|
A:CYS31
|
4.0
|
0.0
|
1.0
|
CB
|
A:HIS52
|
4.1
|
0.0
|
1.0
|
HG3
|
A:MET30
|
4.1
|
0.0
|
1.0
|
HB3
|
A:LYS33
|
4.1
|
0.0
|
1.0
|
H
|
A:HIS52
|
4.2
|
0.0
|
1.0
|
CA
|
A:CYS49
|
4.2
|
0.0
|
1.0
|
NE2
|
A:HIS52
|
4.2
|
0.0
|
1.0
|
HA
|
A:PHE48
|
4.3
|
0.0
|
1.0
|
HB2
|
A:CYS31
|
4.3
|
0.0
|
1.0
|
CA
|
A:CYS31
|
4.3
|
0.0
|
1.0
|
H
|
A:MET30
|
4.3
|
0.0
|
1.0
|
HB2
|
A:CYS49
|
4.4
|
0.0
|
1.0
|
HB3
|
A:PHE48
|
4.4
|
0.0
|
1.0
|
CD2
|
A:HIS52
|
4.5
|
0.0
|
1.0
|
H
|
A:ARG32
|
4.6
|
0.0
|
1.0
|
H
|
A:LEU51
|
4.6
|
0.0
|
1.0
|
HD2
|
A:LYS33
|
4.6
|
0.0
|
1.0
|
HD2
|
A:PHE48
|
4.6
|
0.0
|
1.0
|
N
|
A:HIS52
|
4.6
|
0.0
|
1.0
|
H
|
A:LYS33
|
4.6
|
0.0
|
1.0
|
CA
|
A:CYS28
|
4.7
|
0.0
|
1.0
|
CB
|
A:MET30
|
4.7
|
0.0
|
1.0
|
C
|
A:PHE48
|
4.8
|
0.0
|
1.0
|
CG
|
A:MET30
|
4.8
|
0.0
|
1.0
|
CB
|
A:LEU51
|
4.9
|
0.0
|
1.0
|
HA
|
A:CYS28
|
4.9
|
0.0
|
1.0
|
HB3
|
A:HIS52
|
4.9
|
0.0
|
1.0
|
C
|
A:CYS49
|
4.9
|
0.0
|
1.0
|
CA
|
A:PHE48
|
4.9
|
0.0
|
1.0
|
C
|
A:MET30
|
5.0
|
0.0
|
1.0
|
|
Zinc binding site 2 out
of 2 in 1wfl
Go back to
Zinc Binding Sites List in 1wfl
Zinc binding site 2 out
of 2 in the Solution Structure of the Zf-AN1 Domain From Mouse Zinc Finger Protein 216
Mono view
Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 2 of Solution Structure of the Zf-AN1 Domain From Mouse Zinc Finger Protein 216 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Zn401
b:0.0
occ:1.00
|
SG
|
A:CYS44
|
2.3
|
0.0
|
1.0
|
NE2
|
A:HIS58
|
2.3
|
0.0
|
1.0
|
SG
|
A:CYS42
|
2.4
|
0.0
|
1.0
|
SG
|
A:CYS60
|
2.4
|
0.0
|
1.0
|
HE1
|
A:HIS58
|
2.7
|
0.0
|
1.0
|
CE1
|
A:HIS58
|
2.8
|
0.0
|
1.0
|
HB3
|
A:CYS44
|
2.9
|
0.0
|
1.0
|
HB3
|
A:CYS42
|
3.0
|
0.0
|
1.0
|
HB2
|
A:CYS60
|
3.0
|
0.0
|
1.0
|
CB
|
A:CYS60
|
3.2
|
0.0
|
1.0
|
CB
|
A:CYS42
|
3.2
|
0.0
|
1.0
|
H
|
A:CYS44
|
3.2
|
0.0
|
1.0
|
CB
|
A:CYS44
|
3.2
|
0.0
|
1.0
|
HZ
|
A:PHE48
|
3.2
|
0.0
|
1.0
|
HA
|
A:CYS60
|
3.3
|
0.0
|
1.0
|
HD2
|
A:PRO61
|
3.4
|
0.0
|
1.0
|
HE1
|
A:PHE48
|
3.4
|
0.0
|
1.0
|
HB2
|
A:CYS42
|
3.6
|
0.0
|
1.0
|
CD2
|
A:HIS58
|
3.6
|
0.0
|
1.0
|
CZ
|
A:PHE48
|
3.8
|
0.0
|
1.0
|
CA
|
A:CYS60
|
3.8
|
0.0
|
1.0
|
CE1
|
A:PHE48
|
3.9
|
0.0
|
1.0
|
HB2
|
A:CYS44
|
4.0
|
0.0
|
1.0
|
HB2
|
A:ASN46
|
4.0
|
0.0
|
1.0
|
N
|
A:CYS44
|
4.0
|
0.0
|
1.0
|
ND1
|
A:HIS58
|
4.1
|
0.0
|
1.0
|
HD2
|
A:HIS58
|
4.1
|
0.0
|
1.0
|
HD21
|
A:ASN46
|
4.1
|
0.0
|
1.0
|
HB3
|
A:CYS60
|
4.2
|
0.0
|
1.0
|
CA
|
A:CYS44
|
4.3
|
0.0
|
1.0
|
HB2
|
A:TYR62
|
4.3
|
0.0
|
1.0
|
H
|
A:ARG43
|
4.4
|
0.0
|
1.0
|
CD
|
A:PRO61
|
4.4
|
0.0
|
1.0
|
CG
|
A:HIS58
|
4.5
|
0.0
|
1.0
|
HA
|
A:SER55
|
4.5
|
0.0
|
1.0
|
H
|
A:TYR62
|
4.6
|
0.0
|
1.0
|
CA
|
A:CYS42
|
4.6
|
0.0
|
1.0
|
N
|
A:ARG43
|
4.7
|
0.0
|
1.0
|
C
|
A:CYS60
|
4.8
|
0.0
|
1.0
|
HD1
|
A:HIS58
|
4.8
|
0.0
|
1.0
|
HD3
|
A:PRO61
|
4.8
|
0.0
|
1.0
|
N
|
A:CYS60
|
4.9
|
0.0
|
1.0
|
C
|
A:CYS42
|
4.9
|
0.0
|
1.0
|
CE2
|
A:PHE48
|
4.9
|
0.0
|
1.0
|
N
|
A:PRO61
|
5.0
|
0.0
|
1.0
|
O
|
A:ARG53
|
5.0
|
0.0
|
1.0
|
|
Reference:
T.Tomizawa,
T.Kigawa,
S.Koshiba,
M.Inoue,
S.Yokoyama.
Solution Structure of the Zf-AN1 Domain From Mouse Zinc Finger Protein 216 To Be Published.
Page generated: Wed Oct 16 20:02:57 2024
|