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Zinc in PDB 1wfh: Solution Structrue of the Zf-AN1 Domain From Arabidopsis Thaliana AT2G36320 Protein

Zinc Binding Sites:

The binding sites of Zinc atom in the Solution Structrue of the Zf-AN1 Domain From Arabidopsis Thaliana AT2G36320 Protein (pdb code 1wfh). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Solution Structrue of the Zf-AN1 Domain From Arabidopsis Thaliana AT2G36320 Protein, PDB code: 1wfh:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 1wfh

Go back to Zinc Binding Sites List in 1wfh
Zinc binding site 1 out of 2 in the Solution Structrue of the Zf-AN1 Domain From Arabidopsis Thaliana AT2G36320 Protein


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Solution Structrue of the Zf-AN1 Domain From Arabidopsis Thaliana AT2G36320 Protein within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn201

b:0.0
occ:1.00
SG A:CYS39 2.3 0.0 1.0
ND1 A:HIS42 2.3 0.0 1.0
SG A:CYS21 2.3 0.0 1.0
SG A:CYS18 2.3 0.0 1.0
HB2 A:HIS42 2.8 0.0 1.0
HB A:VAL20 3.0 0.0 1.0
H A:CYS21 3.1 0.0 1.0
CG A:HIS42 3.2 0.0 1.0
CE1 A:HIS42 3.2 0.0 1.0
H A:CYS39 3.2 0.0 1.0
HB3 A:CYS39 3.3 0.0 1.0
HB3 A:CYS18 3.4 0.0 1.0
CB A:CYS18 3.4 0.0 1.0
HB3 A:CYS21 3.5 0.0 1.0
HE1 A:HIS42 3.5 0.0 1.0
CB A:HIS42 3.5 0.0 1.0
CB A:CYS39 3.5 0.0 1.0
CB A:CYS21 3.5 0.0 1.0
HB2 A:CYS18 3.5 0.0 1.0
HG2 A:LYS23 3.6 0.0 1.0
N A:CYS21 3.7 0.0 1.0
HG13 A:VAL20 3.9 0.0 1.0
CB A:VAL20 4.0 0.0 1.0
N A:CYS39 4.0 0.0 1.0
HB3 A:HIS42 4.1 0.0 1.0
H A:HIS42 4.2 0.0 1.0
CA A:CYS21 4.2 0.0 1.0
NE2 A:HIS42 4.2 0.0 1.0
CD2 A:HIS42 4.2 0.0 1.0
HB3 A:LYS23 4.2 0.0 1.0
H A:VAL20 4.2 0.0 1.0
HG12 A:VAL20 4.2 0.0 1.0
CG1 A:VAL20 4.3 0.0 1.0
HB2 A:CYS39 4.3 0.0 1.0
H A:LYS23 4.3 0.0 1.0
CA A:CYS39 4.4 0.0 1.0
HB2 A:CYS21 4.4 0.0 1.0
H A:ARG22 4.4 0.0 1.0
HB3 A:SER41 4.5 0.0 1.0
C A:VAL20 4.5 0.0 1.0
HB3 A:PHE38 4.5 0.0 1.0
N A:HIS42 4.6 0.0 1.0
CG A:LYS23 4.6 0.0 1.0
CA A:HIS42 4.7 0.0 1.0
CA A:VAL20 4.7 0.0 1.0
HA A:PHE38 4.7 0.0 1.0
HD3 A:LYS23 4.8 0.0 1.0
HD1 A:PHE38 4.8 0.0 1.0
C A:CYS21 4.8 0.0 1.0
CA A:CYS18 4.8 0.0 1.0
N A:ARG22 4.8 0.0 1.0
N A:VAL20 4.9 0.0 1.0
HG23 A:VAL20 5.0 0.0 1.0
HG11 A:VAL25 5.0 0.0 1.0
CB A:LYS23 5.0 0.0 1.0

Zinc binding site 2 out of 2 in 1wfh

Go back to Zinc Binding Sites List in 1wfh
Zinc binding site 2 out of 2 in the Solution Structrue of the Zf-AN1 Domain From Arabidopsis Thaliana AT2G36320 Protein


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Solution Structrue of the Zf-AN1 Domain From Arabidopsis Thaliana AT2G36320 Protein within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn401

b:0.0
occ:1.00
SG A:CYS50 2.3 0.0 1.0
SG A:CYS32 2.3 0.0 1.0
SG A:CYS34 2.3 0.0 1.0
NE2 A:HIS48 2.3 0.0 1.0
HA A:CYS50 3.1 0.0 1.0
CE1 A:HIS48 3.2 0.0 1.0
HB3 A:CYS32 3.2 0.0 1.0
HB2 A:CYS50 3.2 0.0 1.0
HB3 A:CYS34 3.2 0.0 1.0
CB A:CYS50 3.3 0.0 1.0
HE1 A:HIS48 3.3 0.0 1.0
H A:CYS34 3.4 0.0 1.0
CB A:CYS32 3.4 0.0 1.0
CD2 A:HIS48 3.4 0.0 1.0
CB A:CYS34 3.4 0.0 1.0
HE2 A:PHE38 3.5 0.0 1.0
HA A:PRO45 3.6 0.0 1.0
HD2 A:HIS48 3.7 0.0 1.0
CA A:CYS50 3.7 0.0 1.0
HB2 A:CYS32 3.8 0.0 1.0
HB3 A:PRO45 3.8 0.0 1.0
HG1 A:THR36 4.1 0.0 1.0
HB2 A:CYS34 4.2 0.0 1.0
N A:CYS34 4.2 0.0 1.0
HG2 A:ARG33 4.2 0.0 1.0
HB3 A:CYS50 4.2 0.0 1.0
OG1 A:THR36 4.3 0.0 1.0
H A:ARG33 4.3 0.0 1.0
CE2 A:PHE38 4.3 0.0 1.0
ND1 A:HIS48 4.4 0.0 1.0
H A:THR51 4.4 0.0 1.0
CA A:CYS34 4.5 0.0 1.0
CG A:HIS48 4.5 0.0 1.0
HZ A:PHE38 4.5 0.0 1.0
CA A:PRO45 4.5 0.0 1.0
CB A:PRO45 4.5 0.0 1.0
HG3 A:ARG33 4.6 0.0 1.0
N A:CYS50 4.7 0.0 1.0
CA A:CYS32 4.7 0.0 1.0
N A:ARG33 4.8 0.0 1.0
C A:CYS50 4.8 0.0 1.0
HB2 A:PRO45 4.8 0.0 1.0
CZ A:PHE38 4.9 0.0 1.0
H A:GLY35 4.9 0.0 1.0
H A:CYS50 4.9 0.0 1.0
N A:THR51 4.9 0.0 1.0
CG A:ARG33 5.0 0.0 1.0

Reference:

T.Tomizawa, T.Kigawa, N.Nemoto, S.Koshiba, M.Inoue, S.Yokoyama. Solution Structrue of the Zf-AN1 Domain From Arabidopsis Thaliana AT2G36320 Protein To Be Published.
Page generated: Wed Dec 16 03:09:12 2020

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