Zinc in PDB 1weq: Solution Structure of Phd Domain in Phd Finger Protein 7
Zinc Binding Sites:
The binding sites of Zinc atom in the Solution Structure of Phd Domain in Phd Finger Protein 7
(pdb code 1weq). This binding sites where shown within
5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the
Solution Structure of Phd Domain in Phd Finger Protein 7, PDB code: 1weq:
Jump to Zinc binding site number:
1;
2;
Zinc binding site 1 out
of 2 in 1weq
Go back to
Zinc Binding Sites List in 1weq
Zinc binding site 1 out
of 2 in the Solution Structure of Phd Domain in Phd Finger Protein 7
Mono view
Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 1 of Solution Structure of Phd Domain in Phd Finger Protein 7 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Zn201
b:0.0
occ:1.00
|
SG
|
A:CYS24
|
2.3
|
0.0
|
1.0
|
ND1
|
A:HIS58
|
2.3
|
0.0
|
1.0
|
SG
|
A:CYS29
|
2.4
|
0.0
|
1.0
|
SG
|
A:CYS61
|
2.4
|
0.0
|
1.0
|
HE1
|
A:HIS58
|
2.6
|
0.0
|
1.0
|
CE1
|
A:HIS58
|
2.7
|
0.0
|
1.0
|
HB2
|
A:CYS61
|
3.1
|
0.0
|
1.0
|
HB2
|
A:CYS24
|
3.2
|
0.0
|
1.0
|
CB
|
A:CYS61
|
3.2
|
0.0
|
1.0
|
HB2
|
A:CYS29
|
3.4
|
0.0
|
1.0
|
HB3
|
A:CYS61
|
3.4
|
0.0
|
1.0
|
CB
|
A:CYS24
|
3.5
|
0.0
|
1.0
|
HG1
|
A:THR57
|
3.5
|
0.0
|
1.0
|
CB
|
A:CYS29
|
3.5
|
0.0
|
1.0
|
CG
|
A:HIS58
|
3.5
|
0.0
|
1.0
|
H
|
A:HIS58
|
3.6
|
0.0
|
1.0
|
OG1
|
A:THR57
|
3.7
|
0.0
|
1.0
|
HA
|
A:CYS29
|
3.7
|
0.0
|
1.0
|
HB1
|
A:ALA26
|
3.8
|
0.0
|
1.0
|
HB2
|
A:HIS58
|
3.8
|
0.0
|
1.0
|
NE2
|
A:HIS58
|
3.9
|
0.0
|
1.0
|
HB3
|
A:CYS24
|
4.1
|
0.0
|
1.0
|
HA2
|
A:GLY34
|
4.1
|
0.0
|
1.0
|
CA
|
A:CYS29
|
4.2
|
0.0
|
1.0
|
CB
|
A:HIS58
|
4.3
|
0.0
|
1.0
|
CD2
|
A:HIS58
|
4.3
|
0.0
|
1.0
|
HB3
|
A:CYS29
|
4.4
|
0.0
|
1.0
|
N
|
A:HIS58
|
4.5
|
0.0
|
1.0
|
HA
|
A:CYS24
|
4.5
|
0.0
|
1.0
|
H
|
A:ALA26
|
4.6
|
0.0
|
1.0
|
HE2
|
A:PHE38
|
4.6
|
0.0
|
1.0
|
HE2
|
A:HIS58
|
4.6
|
0.0
|
1.0
|
CA
|
A:CYS24
|
4.6
|
0.0
|
1.0
|
CA
|
A:CYS61
|
4.7
|
0.0
|
1.0
|
HB2
|
A:ALA26
|
4.7
|
0.0
|
1.0
|
CB
|
A:ALA26
|
4.7
|
0.0
|
1.0
|
H
|
A:LEU30
|
4.8
|
0.0
|
1.0
|
HA
|
A:CYS61
|
4.9
|
0.0
|
1.0
|
O
|
A:ILE28
|
5.0
|
0.0
|
1.0
|
|
Zinc binding site 2 out
of 2 in 1weq
Go back to
Zinc Binding Sites List in 1weq
Zinc binding site 2 out
of 2 in the Solution Structure of Phd Domain in Phd Finger Protein 7
Mono view
Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 2 of Solution Structure of Phd Domain in Phd Finger Protein 7 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Zn401
b:0.0
occ:1.00
|
SG
|
A:CYS52
|
2.3
|
0.0
|
1.0
|
SG
|
A:CYS73
|
2.3
|
0.0
|
1.0
|
SG
|
A:CYS49
|
2.4
|
0.0
|
1.0
|
SG
|
A:CYS76
|
2.4
|
0.0
|
1.0
|
H
|
A:CYS52
|
2.6
|
0.0
|
1.0
|
HB
|
A:THR51
|
3.0
|
0.0
|
1.0
|
H
|
A:CYS73
|
3.1
|
0.0
|
1.0
|
HB2
|
A:CYS76
|
3.2
|
0.0
|
1.0
|
H
|
A:GLY53
|
3.3
|
0.0
|
1.0
|
CB
|
A:CYS49
|
3.4
|
0.0
|
1.0
|
HB3
|
A:CYS73
|
3.4
|
0.0
|
1.0
|
HB2
|
A:CYS49
|
3.4
|
0.0
|
1.0
|
CB
|
A:CYS76
|
3.4
|
0.0
|
1.0
|
CB
|
A:CYS52
|
3.5
|
0.0
|
1.0
|
HB3
|
A:CYS49
|
3.5
|
0.0
|
1.0
|
N
|
A:CYS52
|
3.5
|
0.0
|
1.0
|
CB
|
A:CYS73
|
3.5
|
0.0
|
1.0
|
HB3
|
A:CYS52
|
3.5
|
0.0
|
1.0
|
N
|
A:CYS73
|
3.9
|
0.0
|
1.0
|
HB3
|
A:CYS76
|
4.0
|
0.0
|
1.0
|
H
|
A:SER54
|
4.0
|
0.0
|
1.0
|
CA
|
A:CYS52
|
4.0
|
0.0
|
1.0
|
CB
|
A:THR51
|
4.1
|
0.0
|
1.0
|
N
|
A:GLY53
|
4.1
|
0.0
|
1.0
|
HG3
|
A:GLU75
|
4.1
|
0.0
|
1.0
|
CA
|
A:CYS73
|
4.3
|
0.0
|
1.0
|
H
|
A:CYS76
|
4.3
|
0.0
|
1.0
|
HB2
|
A:CYS73
|
4.4
|
0.0
|
1.0
|
H
|
A:THR51
|
4.4
|
0.0
|
1.0
|
HG2
|
A:GLU75
|
4.4
|
0.0
|
1.0
|
HB2
|
A:CYS52
|
4.4
|
0.0
|
1.0
|
HB3
|
A:GLU72
|
4.4
|
0.0
|
1.0
|
HG21
|
A:THR51
|
4.4
|
0.0
|
1.0
|
H
|
A:HIS55
|
4.5
|
0.0
|
1.0
|
C
|
A:CYS52
|
4.6
|
0.0
|
1.0
|
C
|
A:THR51
|
4.6
|
0.0
|
1.0
|
HA
|
A:GLU72
|
4.6
|
0.0
|
1.0
|
HB2
|
A:SER54
|
4.6
|
0.0
|
1.0
|
HD2
|
A:HIS55
|
4.6
|
0.0
|
1.0
|
CA
|
A:CYS76
|
4.7
|
0.0
|
1.0
|
CG
|
A:GLU75
|
4.7
|
0.0
|
1.0
|
CA
|
A:THR51
|
4.7
|
0.0
|
1.0
|
CG2
|
A:THR51
|
4.7
|
0.0
|
1.0
|
OE2
|
A:GLU75
|
4.7
|
0.0
|
1.0
|
N
|
A:THR51
|
4.8
|
0.0
|
1.0
|
N
|
A:CYS76
|
4.8
|
0.0
|
1.0
|
HG23
|
A:THR51
|
4.8
|
0.0
|
1.0
|
CA
|
A:CYS49
|
4.8
|
0.0
|
1.0
|
CD2
|
A:HIS55
|
4.9
|
0.0
|
1.0
|
HG2
|
A:GLU72
|
4.9
|
0.0
|
1.0
|
OG1
|
A:THR51
|
4.9
|
0.0
|
1.0
|
N
|
A:SER54
|
4.9
|
0.0
|
1.0
|
HB2
|
A:HIS55
|
5.0
|
0.0
|
1.0
|
C
|
A:GLU72
|
5.0
|
0.0
|
1.0
|
C
|
A:CYS73
|
5.0
|
0.0
|
1.0
|
HA
|
A:CYS76
|
5.0
|
0.0
|
1.0
|
H
|
A:ALA50
|
5.0
|
0.0
|
1.0
|
HA
|
A:CYS52
|
5.0
|
0.0
|
1.0
|
|
Reference:
F.He,
Y.Muto,
M.Inoue,
T.Kigawa,
M.Shirouzu,
T.Terada,
S.Yokoyama.
Solution Structure of Phd Domain in Phd Finger Protein 7 To Be Published.
Page generated: Wed Oct 16 20:00:42 2024
|