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Zinc in PDB 1uv0: Pancreatitis-Associated Protein 1 From Human

Protein crystallography data

The structure of Pancreatitis-Associated Protein 1 From Human, PDB code: 1uv0 was solved by C.Abergel, W.Shepard, L.Christal, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 21.75 / 1.78
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 30.730, 49.350, 92.150, 90.00, 90.00, 90.00
R / Rfree (%) 18.8 / 24.4

Zinc Binding Sites:

The binding sites of Zinc atom in the Pancreatitis-Associated Protein 1 From Human (pdb code 1uv0). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 3 binding sites of Zinc where determined in the Pancreatitis-Associated Protein 1 From Human, PDB code: 1uv0:
Jump to Zinc binding site number: 1; 2; 3;

Zinc binding site 1 out of 3 in 1uv0

Go back to Zinc Binding Sites List in 1uv0
Zinc binding site 1 out of 3 in the Pancreatitis-Associated Protein 1 From Human


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Pancreatitis-Associated Protein 1 From Human within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn1150

b:15.7
occ:1.00
OE1 A:GLU95 2.0 17.2 1.0
NE2 A:HIS81 2.1 18.9 1.0
O A:HOH2160 2.1 4.7 1.0
CD A:GLU95 3.0 17.4 1.0
CE1 A:HIS81 3.0 18.9 1.0
CD2 A:HIS81 3.1 18.8 1.0
CG A:GLU95 3.4 13.4 1.0
OE2 A:GLU95 4.1 17.3 1.0
ND1 A:HIS81 4.2 16.2 1.0
CG A:PRO83 4.2 17.0 1.0
CG A:HIS81 4.3 16.0 1.0
CD A:PRO83 4.3 15.8 1.0
CB A:PRO83 4.4 17.5 1.0
CB A:GLU95 4.9 13.1 1.0

Zinc binding site 2 out of 3 in 1uv0

Go back to Zinc Binding Sites List in 1uv0
Zinc binding site 2 out of 3 in the Pancreatitis-Associated Protein 1 From Human


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Pancreatitis-Associated Protein 1 From Human within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn1151

b:48.4
occ:1.00
CE1 A:HIS24 2.4 21.7 1.0
O A:HOH2161 2.5 40.8 1.0
O A:HOH2162 2.7 48.1 1.0
O A:HOH2022 2.8 40.8 1.0
ND1 A:HIS24 3.3 21.8 1.0
NE2 A:HIS24 3.4 24.6 1.0
CG2 A:THR148 3.8 21.8 1.0
O A:HOH2106 4.0 32.0 1.0
O A:HOH2153 4.2 23.9 1.0
O A:HOH2103 4.2 40.7 1.0
O A:SER47 4.3 14.1 1.0
CB A:SER47 4.5 18.3 1.0
O A:HOH2021 4.5 40.6 1.0
CG A:HIS24 4.5 20.0 1.0
O A:HOH2056 4.5 23.4 1.0
CD2 A:HIS24 4.5 21.5 1.0

Zinc binding site 3 out of 3 in 1uv0

Go back to Zinc Binding Sites List in 1uv0
Zinc binding site 3 out of 3 in the Pancreatitis-Associated Protein 1 From Human


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 3 of Pancreatitis-Associated Protein 1 From Human within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn1152

b:39.9
occ:1.00
NE2 A:HIS119 2.2 24.4 1.0
O A:HOH2163 2.5 30.2 1.0
CE1 A:HIS119 3.1 25.0 1.0
CD2 A:HIS119 3.3 22.9 1.0
O A:PRO117 4.1 17.1 1.0
O A:GLN85 4.2 38.1 1.0
ND1 A:HIS119 4.3 24.0 1.0
CG A:HIS119 4.4 19.1 1.0
OG A:SER116 4.4 27.9 1.0
O A:HOH2075 4.7 37.0 1.0
C A:GLN85 4.8 37.5 1.0
OE1 A:GLN85 4.9 45.2 1.0

Reference:

C.Abergel, S.Chenivesse, M.G.Stinnakre, S.Guasco, C.Brechot, J.M.Claverie, E.Devinoy, L.Christa. Crystallization and Preliminary Crystallographic Study of Hip/Pap, A Human C-Lectin Overexpressed in Primary Liver Cancers. Acta Crystallogr.,Sect.D V. 55 1487 1999.
ISSN: ISSN 0907-4449
PubMed: 10417404
DOI: 10.1107/S0907444999007969
Page generated: Wed Oct 16 19:37:48 2024

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