Zinc in PDB 1u7j: Solution Structure of A Diiron Protein Model

The binding sites of Zinc atom in the Solution Structure of A Diiron Protein Model (pdb code 1u7j). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Solution Structure of A Diiron Protein Model, PDB code: 1u7j:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the Solution Structure of A Diiron Protein Model


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Solution Structure of A Diiron Protein Model within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn50 b:0.0 occ:1.00 OE2 B:GLU37 1.8 0.0 1.0 OE1 A:GLU37 1.8 0.0 1.0 OE2 A:GLU11 1.8 0.0 1.0 OE1 A:GLU11 1.9 0.0 1.0 ND1 A:HIS40 2.1 0.0 1.0 CD A:GLU11 2.3 0.0 1.0 CD A:GLU37 2.8 0.0 1.0 HB3 A:HIS40 3.0 0.0 1.0 OE2 A:GLU37 3.0 0.0 1.0 CD B:GLU37 3.0 0.0 1.0 CG A:HIS40 3.1 0.0 1.0 CE1 A:HIS40 3.2 0.0 1.0 CB A:HIS40 3.3 0.0 1.0 HB2 A:HIS40 3.4 0.0 1.0 HE1 A:HIS40 3.5 0.0 1.0 OE1 B:GLU37 3.6 0.0 1.0 CG A:GLU11 3.8 0.0 1.0 HA A:GLU37 3.8 0.0 1.0 HE2 B:TYR18 3.8 0.0 1.0 ZN B:ZN150 4.0 0.0 1.0 CG B:GLU37 4.1 0.0 1.0 HG2 B:GLU37 4.1 0.0 1.0 CG A:GLU37 4.2 0.0 1.0 HB3 A:GLU11 4.2 0.0 1.0 HG3 A:GLU11 4.2 0.0 1.0 HG22 B:ILE33 4.3 0.0 1.0 CD2 A:HIS40 4.3 0.0 1.0 HG3 B:GLU37 4.3 0.0 1.0 NE2 A:HIS40 4.3 0.0 1.0 HG2 A:GLU11 4.4 0.0 1.0 HB3 A:GLU37 4.5 0.0 1.0 OE1 B:GLU11 4.5 0.0 1.0 CE2 B:TYR18 4.5 0.0 1.0 CB A:GLU11 4.6 0.0 1.0 HE1 B:HIS40 4.6 0.0 1.0 CB A:GLU37 4.7 0.0 1.0 HA A:GLU11 4.7 0.0 1.0 CA A:GLU37 4.7 0.0 1.0 HG3 A:GLU37 4.8 0.0 1.0 HG2 A:GLU37 4.8 0.0 1.0 OH B:TYR18 4.8 0.0 1.0 CA A:HIS40 4.8 0.0 1.0 HG23 B:ILE33 4.9 0.0 1.0 HB3 B:ALA14 4.9 0.0 1.0 ND1 B:HIS40 5.0 0.0 1.0 CZ B:TYR18 5.0 0.0 1.0

Zinc binding site 2 out of 2 in the Solution Structure of A Diiron Protein Model


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Solution Structure of A Diiron Protein Model within 5.0Å range: probe atom residue distance (Å) B Occ B:Zn150 b:0.0 occ:1.00 OE2 A:GLU37 1.8 0.0 1.0 OE1 B:GLU37 1.8 0.0 1.0 OE2 B:GLU11 1.8 0.0 1.0 OE1 B:GLU11 1.9 0.0 1.0 ND1 B:HIS40 2.1 0.0 1.0 CD B:GLU11 2.3 0.0 1.0 CD B:GLU37 2.8 0.0 1.0 HB3 B:HIS40 3.0 0.0 1.0 CD A:GLU37 3.0 0.0 1.0 CG B:HIS40 3.0 0.0 1.0 OE2 B:GLU37 3.1 0.0 1.0 CE1 B:HIS40 3.2 0.0 1.0 HB2 B:HIS40 3.2 0.0 1.0 CB B:HIS40 3.3 0.0 1.0 HE1 B:HIS40 3.5 0.0 1.0 OE1 A:GLU37 3.7 0.0 1.0 HA B:GLU37 3.7 0.0 1.0 CG B:GLU11 3.8 0.0 1.0 ZN A:ZN50 4.0 0.0 1.0 HG2 A:GLU37 4.0 0.0 1.0 CG A:GLU37 4.0 0.0 1.0 HG3 A:GLU37 4.1 0.0 1.0 HB3 B:GLU11 4.1 0.0 1.0 HG22 A:ILE33 4.2 0.0 1.0 CG B:GLU37 4.2 0.0 1.0 HG3 B:GLU11 4.2 0.0 1.0 CD2 B:HIS40 4.2 0.0 1.0 NE2 B:HIS40 4.3 0.0 1.0 OE1 A:GLU11 4.4 0.0 1.0 HG2 B:GLU11 4.4 0.0 1.0 HB3 B:GLU37 4.5 0.0 1.0 HE2 A:TYR18 4.5 0.0 1.0 HA B:GLU11 4.5 0.0 1.0 CB B:GLU11 4.5 0.0 1.0 CA B:GLU37 4.6 0.0 1.0 CB B:GLU37 4.7 0.0 1.0 HE1 A:HIS40 4.7 0.0 1.0 CA B:HIS40 4.8 0.0 1.0 HG23 A:ILE33 4.8 0.0 1.0 HG2 B:GLU37 4.8 0.0 1.0 HG3 B:GLU37 4.9 0.0 1.0 CG2 A:ILE33 4.9 0.0 1.0

S.J.Lahr, D.E.Engel, S.E.Stayrook, O.Maglio, B.North, S.Geremia, A.Lombardi, W.F.Degrado. Analysis and Design of Turns in Alpha-Helical Hairpins J.Mol.Biol. V. 346 1441 2005.
ISSN: ISSN 0022-2836
PubMed: 15713492
DOI: 10.1016/J.JMB.2004.12.016