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Zinc in PDB 1tot: Zz Domain of Cbp- A Novel Fold For A Protein Interaction Module

Enzymatic activity of Zz Domain of Cbp- A Novel Fold For A Protein Interaction Module

All present enzymatic activity of Zz Domain of Cbp- A Novel Fold For A Protein Interaction Module:
2.3.1.48;

Zinc Binding Sites:

The binding sites of Zinc atom in the Zz Domain of Cbp- A Novel Fold For A Protein Interaction Module (pdb code 1tot). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Zz Domain of Cbp- A Novel Fold For A Protein Interaction Module, PDB code: 1tot:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 1tot

Go back to Zinc Binding Sites List in 1tot
Zinc binding site 1 out of 2 in the Zz Domain of Cbp- A Novel Fold For A Protein Interaction Module


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Zz Domain of Cbp- A Novel Fold For A Protein Interaction Module within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn53

b:10.0
occ:1.00
NE2 A:HIS40 2.1 10.0 1.0
ND1 A:HIS42 2.1 10.0 1.0
HD2 A:HIS40 2.3 10.0 1.0
SG A:CYS22 2.3 10.0 1.0
SG A:CYS25 2.3 10.0 1.0
CD2 A:HIS40 2.5 10.0 1.0
HG13 A:VAL24 2.7 10.0 1.0
CE1 A:HIS42 2.9 10.0 1.0
HE1 A:HIS42 3.0 10.0 1.0
HB2 A:HIS42 3.3 10.0 1.0
CG A:HIS42 3.3 10.0 1.0
HB3 A:CYS22 3.4 10.0 1.0
CB A:CYS22 3.4 10.0 1.0
CE1 A:HIS40 3.4 10.0 1.0
HG12 A:VAL24 3.6 10.0 1.0
CG1 A:VAL24 3.6 10.0 1.0
HB2 A:CYS22 3.7 10.0 1.0
CG A:HIS40 3.8 10.0 1.0
CB A:HIS42 3.8 10.0 1.0
H A:CYS25 3.9 10.0 1.0
CB A:CYS25 3.9 10.0 1.0
HB2 A:CYS25 4.0 10.0 1.0
HE1 A:HIS40 4.1 10.0 1.0
HG11 A:VAL24 4.1 10.0 1.0
NE2 A:HIS42 4.1 10.0 1.0
HB3 A:TYR28 4.2 10.0 1.0
ND1 A:HIS40 4.2 10.0 1.0
HB3 A:HIS42 4.3 10.0 1.0
HG21 A:VAL24 4.3 10.0 1.0
CD2 A:HIS42 4.3 10.0 1.0
HD1 A:TYR28 4.4 10.0 1.0
H A:HIS42 4.5 10.0 1.0
CD1 A:TYR28 4.5 10.0 1.0
HG23 A:VAL24 4.5 10.0 1.0
HB3 A:CYS25 4.5 10.0 1.0
N A:CYS25 4.7 10.0 1.0
CA A:CYS22 4.7 10.0 1.0
CG2 A:VAL24 4.8 10.0 1.0
HA A:CYS22 4.8 10.0 1.0
CG A:TYR28 4.8 10.0 1.0
CB A:VAL24 4.8 10.0 1.0
HB3 A:HIS40 4.8 10.0 1.0
CE1 A:TYR28 4.9 10.0 1.0
HE1 A:MET44 4.9 10.0 1.0
HG3 A:MET44 4.9 10.0 1.0
CB A:HIS40 4.9 10.0 1.0
CA A:CYS25 5.0 10.0 1.0
HE2 A:HIS42 5.0 10.0 1.0
CB A:TYR28 5.0 10.0 1.0

Zinc binding site 2 out of 2 in 1tot

Go back to Zinc Binding Sites List in 1tot
Zinc binding site 2 out of 2 in the Zz Domain of Cbp- A Novel Fold For A Protein Interaction Module


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Zz Domain of Cbp- A Novel Fold For A Protein Interaction Module within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn54

b:10.0
occ:1.00
SG A:CYS9 2.3 10.0 1.0
SG A:CYS31 2.3 10.0 1.0
SG A:CYS12 2.3 10.0 1.0
SG A:CYS34 2.3 10.0 1.0
HB2 A:CYS34 2.7 10.0 1.0
H A:CYS31 3.0 10.0 1.0
CB A:CYS34 3.1 10.0 1.0
CB A:CYS9 3.3 10.0 1.0
HB2 A:CYS9 3.4 10.0 1.0
HB3 A:CYS9 3.4 10.0 1.0
CB A:CYS31 3.6 10.0 1.0
H A:CYS34 3.6 10.0 1.0
HB3 A:CYS31 3.6 10.0 1.0
H A:CYS12 3.6 10.0 1.0
HB3 A:CYS34 3.7 10.0 1.0
HB3 A:GLU11 3.7 10.0 1.0
HB2 A:GLU11 3.7 10.0 1.0
CB A:CYS12 3.8 10.0 1.0
HD21 A:ASN33 3.8 10.0 1.0
N A:CYS12 3.9 10.0 1.0
HB2 A:CYS12 3.9 10.0 1.0
N A:CYS31 3.9 10.0 1.0
HZ1 A:LYS38 4.2 10.0 1.0
CA A:CYS34 4.2 10.0 1.0
N A:CYS34 4.2 10.0 1.0
CB A:GLU11 4.2 10.0 1.0
H A:GLU11 4.3 10.0 1.0
CA A:CYS31 4.3 10.0 1.0
C A:GLU11 4.4 10.0 1.0
CA A:CYS12 4.4 10.0 1.0
HA A:LEU30 4.4 10.0 1.0
HB2 A:CYS31 4.4 10.0 1.0
HB3 A:CYS12 4.6 10.0 1.0
HA A:CYS34 4.7 10.0 1.0
CA A:CYS9 4.7 10.0 1.0
CA A:GLU11 4.7 10.0 1.0
HD22 A:LEU30 4.7 10.0 1.0
HA A:CYS12 4.8 10.0 1.0
HB3 A:ASN33 4.8 10.0 1.0
ND2 A:ASN33 4.8 10.0 1.0
O A:CYS31 4.8 10.0 1.0
C A:CYS31 4.9 10.0 1.0
HZ3 A:LYS38 4.9 10.0 1.0
N A:GLU11 4.9 10.0 1.0
HA A:CYS9 5.0 10.0 1.0
NZ A:LYS38 5.0 10.0 1.0

Reference:

G.B.Legge, M.A.Martinez-Yamout, D.M.Hambly, T.Trinh, B.M.Lee, H.J.Dyson, P.E.Wright. Zz Domain of Cbp: An Unusual Zinc Finger Fold in A Protein Interaction Module J.Mol.Biol. V. 343 1081 2004.
ISSN: ISSN 0022-2836
PubMed: 15476823
DOI: 10.1016/J.JMB.2004.08.087
Page generated: Wed Oct 16 19:15:38 2024

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