Zinc in PDB 1tot: Zz Domain of Cbp- A Novel Fold For A Protein Interaction Module
Enzymatic activity of Zz Domain of Cbp- A Novel Fold For A Protein Interaction Module
All present enzymatic activity of Zz Domain of Cbp- A Novel Fold For A Protein Interaction Module:
2.3.1.48;
Zinc Binding Sites:
The binding sites of Zinc atom in the Zz Domain of Cbp- A Novel Fold For A Protein Interaction Module
(pdb code 1tot). This binding sites where shown within
5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the
Zz Domain of Cbp- A Novel Fold For A Protein Interaction Module, PDB code: 1tot:
Jump to Zinc binding site number:
1;
2;
Zinc binding site 1 out
of 2 in 1tot
Go back to
Zinc Binding Sites List in 1tot
Zinc binding site 1 out
of 2 in the Zz Domain of Cbp- A Novel Fold For A Protein Interaction Module
Mono view
Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 1 of Zz Domain of Cbp- A Novel Fold For A Protein Interaction Module within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Zn53
b:10.0
occ:1.00
|
NE2
|
A:HIS40
|
2.1
|
10.0
|
1.0
|
ND1
|
A:HIS42
|
2.1
|
10.0
|
1.0
|
HD2
|
A:HIS40
|
2.3
|
10.0
|
1.0
|
SG
|
A:CYS22
|
2.3
|
10.0
|
1.0
|
SG
|
A:CYS25
|
2.3
|
10.0
|
1.0
|
CD2
|
A:HIS40
|
2.5
|
10.0
|
1.0
|
HG13
|
A:VAL24
|
2.7
|
10.0
|
1.0
|
CE1
|
A:HIS42
|
2.9
|
10.0
|
1.0
|
HE1
|
A:HIS42
|
3.0
|
10.0
|
1.0
|
HB2
|
A:HIS42
|
3.3
|
10.0
|
1.0
|
CG
|
A:HIS42
|
3.3
|
10.0
|
1.0
|
HB3
|
A:CYS22
|
3.4
|
10.0
|
1.0
|
CB
|
A:CYS22
|
3.4
|
10.0
|
1.0
|
CE1
|
A:HIS40
|
3.4
|
10.0
|
1.0
|
HG12
|
A:VAL24
|
3.6
|
10.0
|
1.0
|
CG1
|
A:VAL24
|
3.6
|
10.0
|
1.0
|
HB2
|
A:CYS22
|
3.7
|
10.0
|
1.0
|
CG
|
A:HIS40
|
3.8
|
10.0
|
1.0
|
CB
|
A:HIS42
|
3.8
|
10.0
|
1.0
|
H
|
A:CYS25
|
3.9
|
10.0
|
1.0
|
CB
|
A:CYS25
|
3.9
|
10.0
|
1.0
|
HB2
|
A:CYS25
|
4.0
|
10.0
|
1.0
|
HE1
|
A:HIS40
|
4.1
|
10.0
|
1.0
|
HG11
|
A:VAL24
|
4.1
|
10.0
|
1.0
|
NE2
|
A:HIS42
|
4.1
|
10.0
|
1.0
|
HB3
|
A:TYR28
|
4.2
|
10.0
|
1.0
|
ND1
|
A:HIS40
|
4.2
|
10.0
|
1.0
|
HB3
|
A:HIS42
|
4.3
|
10.0
|
1.0
|
HG21
|
A:VAL24
|
4.3
|
10.0
|
1.0
|
CD2
|
A:HIS42
|
4.3
|
10.0
|
1.0
|
HD1
|
A:TYR28
|
4.4
|
10.0
|
1.0
|
H
|
A:HIS42
|
4.5
|
10.0
|
1.0
|
CD1
|
A:TYR28
|
4.5
|
10.0
|
1.0
|
HG23
|
A:VAL24
|
4.5
|
10.0
|
1.0
|
HB3
|
A:CYS25
|
4.5
|
10.0
|
1.0
|
N
|
A:CYS25
|
4.7
|
10.0
|
1.0
|
CA
|
A:CYS22
|
4.7
|
10.0
|
1.0
|
CG2
|
A:VAL24
|
4.8
|
10.0
|
1.0
|
HA
|
A:CYS22
|
4.8
|
10.0
|
1.0
|
CG
|
A:TYR28
|
4.8
|
10.0
|
1.0
|
CB
|
A:VAL24
|
4.8
|
10.0
|
1.0
|
HB3
|
A:HIS40
|
4.8
|
10.0
|
1.0
|
CE1
|
A:TYR28
|
4.9
|
10.0
|
1.0
|
HE1
|
A:MET44
|
4.9
|
10.0
|
1.0
|
HG3
|
A:MET44
|
4.9
|
10.0
|
1.0
|
CB
|
A:HIS40
|
4.9
|
10.0
|
1.0
|
CA
|
A:CYS25
|
5.0
|
10.0
|
1.0
|
HE2
|
A:HIS42
|
5.0
|
10.0
|
1.0
|
CB
|
A:TYR28
|
5.0
|
10.0
|
1.0
|
|
Zinc binding site 2 out
of 2 in 1tot
Go back to
Zinc Binding Sites List in 1tot
Zinc binding site 2 out
of 2 in the Zz Domain of Cbp- A Novel Fold For A Protein Interaction Module
Mono view
Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 2 of Zz Domain of Cbp- A Novel Fold For A Protein Interaction Module within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Zn54
b:10.0
occ:1.00
|
SG
|
A:CYS9
|
2.3
|
10.0
|
1.0
|
SG
|
A:CYS31
|
2.3
|
10.0
|
1.0
|
SG
|
A:CYS12
|
2.3
|
10.0
|
1.0
|
SG
|
A:CYS34
|
2.3
|
10.0
|
1.0
|
HB2
|
A:CYS34
|
2.7
|
10.0
|
1.0
|
H
|
A:CYS31
|
3.0
|
10.0
|
1.0
|
CB
|
A:CYS34
|
3.1
|
10.0
|
1.0
|
CB
|
A:CYS9
|
3.3
|
10.0
|
1.0
|
HB2
|
A:CYS9
|
3.4
|
10.0
|
1.0
|
HB3
|
A:CYS9
|
3.4
|
10.0
|
1.0
|
CB
|
A:CYS31
|
3.6
|
10.0
|
1.0
|
H
|
A:CYS34
|
3.6
|
10.0
|
1.0
|
HB3
|
A:CYS31
|
3.6
|
10.0
|
1.0
|
H
|
A:CYS12
|
3.6
|
10.0
|
1.0
|
HB3
|
A:CYS34
|
3.7
|
10.0
|
1.0
|
HB3
|
A:GLU11
|
3.7
|
10.0
|
1.0
|
HB2
|
A:GLU11
|
3.7
|
10.0
|
1.0
|
CB
|
A:CYS12
|
3.8
|
10.0
|
1.0
|
HD21
|
A:ASN33
|
3.8
|
10.0
|
1.0
|
N
|
A:CYS12
|
3.9
|
10.0
|
1.0
|
HB2
|
A:CYS12
|
3.9
|
10.0
|
1.0
|
N
|
A:CYS31
|
3.9
|
10.0
|
1.0
|
HZ1
|
A:LYS38
|
4.2
|
10.0
|
1.0
|
CA
|
A:CYS34
|
4.2
|
10.0
|
1.0
|
N
|
A:CYS34
|
4.2
|
10.0
|
1.0
|
CB
|
A:GLU11
|
4.2
|
10.0
|
1.0
|
H
|
A:GLU11
|
4.3
|
10.0
|
1.0
|
CA
|
A:CYS31
|
4.3
|
10.0
|
1.0
|
C
|
A:GLU11
|
4.4
|
10.0
|
1.0
|
CA
|
A:CYS12
|
4.4
|
10.0
|
1.0
|
HA
|
A:LEU30
|
4.4
|
10.0
|
1.0
|
HB2
|
A:CYS31
|
4.4
|
10.0
|
1.0
|
HB3
|
A:CYS12
|
4.6
|
10.0
|
1.0
|
HA
|
A:CYS34
|
4.7
|
10.0
|
1.0
|
CA
|
A:CYS9
|
4.7
|
10.0
|
1.0
|
CA
|
A:GLU11
|
4.7
|
10.0
|
1.0
|
HD22
|
A:LEU30
|
4.7
|
10.0
|
1.0
|
HA
|
A:CYS12
|
4.8
|
10.0
|
1.0
|
HB3
|
A:ASN33
|
4.8
|
10.0
|
1.0
|
ND2
|
A:ASN33
|
4.8
|
10.0
|
1.0
|
O
|
A:CYS31
|
4.8
|
10.0
|
1.0
|
C
|
A:CYS31
|
4.9
|
10.0
|
1.0
|
HZ3
|
A:LYS38
|
4.9
|
10.0
|
1.0
|
N
|
A:GLU11
|
4.9
|
10.0
|
1.0
|
HA
|
A:CYS9
|
5.0
|
10.0
|
1.0
|
NZ
|
A:LYS38
|
5.0
|
10.0
|
1.0
|
|
Reference:
G.B.Legge,
M.A.Martinez-Yamout,
D.M.Hambly,
T.Trinh,
B.M.Lee,
H.J.Dyson,
P.E.Wright.
Zz Domain of Cbp: An Unusual Zinc Finger Fold in A Protein Interaction Module J.Mol.Biol. V. 343 1081 2004.
ISSN: ISSN 0022-2836
PubMed: 15476823
DOI: 10.1016/J.JMB.2004.08.087
Page generated: Wed Oct 16 19:15:38 2024
|