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Zinc in PDB 1su0: Crystal Structure of A Hypothetical Protein at 2.3 A Resolution

Protein crystallography data

The structure of Crystal Structure of A Hypothetical Protein at 2.3 A Resolution, PDB code: 1su0 was solved by J.Liu, N.Oganesyan, D.-H.Shin, J.Jancarik, R.Pufan, H.Yokota, R.Kim, S.-H.Kim, Berkeley Structural Genomics Center (Bsgc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 2.30
Space group I 4 2 2
Cell size a, b, c (Å), α, β, γ (°) 72.014, 72.014, 112.713, 90.00, 90.00, 90.00
R / Rfree (%) 22 / 25.6

Zinc Binding Sites:

The binding sites of Zinc atom in the Crystal Structure of A Hypothetical Protein at 2.3 A Resolution (pdb code 1su0). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of A Hypothetical Protein at 2.3 A Resolution, PDB code: 1su0:

Zinc binding site 1 out of 1 in 1su0

Go back to Zinc Binding Sites List in 1su0
Zinc binding site 1 out of 1 in the Crystal Structure of A Hypothetical Protein at 2.3 A Resolution


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of A Hypothetical Protein at 2.3 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Zn160

b:69.8
occ:1.00
SG B:CYS127 2.2 32.0 1.0
OD1 B:ASP42 2.4 24.3 1.0
SG B:CYS65 2.6 26.7 1.0
SG B:CYS40 2.8 26.1 1.0
OD2 B:ASP42 2.9 25.9 1.0
CG B:ASP42 3.1 24.7 1.0
CB B:CYS127 3.1 26.5 1.0
CB B:CYS40 3.2 25.6 1.0
CB B:CYS65 3.5 26.2 1.0
CA B:CYS127 4.0 26.7 1.0
CB B:SER68 4.2 23.1 1.0
N B:CYS65 4.3 26.7 1.0
CG B:PRO38 4.4 26.2 1.0
CA B:CYS65 4.5 26.7 1.0
CB B:ASP42 4.6 24.4 1.0
CA B:CYS40 4.7 25.9 1.0
NH1 B:ARG124 4.7 22.9 1.0
CD B:PRO38 4.8 26.5 1.0
N B:CYS127 4.8 26.2 1.0
OG B:SER68 4.9 24.9 1.0

Reference:

J.Liu, N.Oganesyan, D.H.Shin, J.Jancarik, H.Yokota, R.Kim, S.H.Kim. Structural Characterization of An Iron-Sulfur Cluster Assembly Protein Iscu in A Zinc-Bound Form. Proteins V. 59 875 2005.
ISSN: ISSN 0887-3585
PubMed: 15815978
DOI: 10.1002/PROT.20421
Page generated: Wed Oct 16 18:55:17 2024

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