Atomistry » Zinc » PDB 1sdx-1sx1 » 1sg6
Atomistry »
  Zinc »
    PDB 1sdx-1sx1 »
      1sg6 »

Zinc in PDB 1sg6: Crystal Structure of Aspergillus Nidulans 3-Dehydroquinate Synthase (Andhqs) in Complex with ZN2+ and Nad+, at 1.7D

Enzymatic activity of Crystal Structure of Aspergillus Nidulans 3-Dehydroquinate Synthase (Andhqs) in Complex with ZN2+ and Nad+, at 1.7D

All present enzymatic activity of Crystal Structure of Aspergillus Nidulans 3-Dehydroquinate Synthase (Andhqs) in Complex with ZN2+ and Nad+, at 1.7D:
4.2.3.4;

Protein crystallography data

The structure of Crystal Structure of Aspergillus Nidulans 3-Dehydroquinate Synthase (Andhqs) in Complex with ZN2+ and Nad+, at 1.7D, PDB code: 1sg6 was solved by C.E.Nichols, A.R.Hawkins, D.K.Stammers, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.00 / 1.70
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 90.020, 104.510, 177.440, 90.00, 90.00, 90.00
R / Rfree (%) 19.5 / 25

Zinc Binding Sites:

The binding sites of Zinc atom in the Crystal Structure of Aspergillus Nidulans 3-Dehydroquinate Synthase (Andhqs) in Complex with ZN2+ and Nad+, at 1.7D (pdb code 1sg6). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Crystal Structure of Aspergillus Nidulans 3-Dehydroquinate Synthase (Andhqs) in Complex with ZN2+ and Nad+, at 1.7D, PDB code: 1sg6:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 1sg6

Go back to Zinc Binding Sites List in 1sg6
Zinc binding site 1 out of 2 in the Crystal Structure of Aspergillus Nidulans 3-Dehydroquinate Synthase (Andhqs) in Complex with ZN2+ and Nad+, at 1.7D


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of Aspergillus Nidulans 3-Dehydroquinate Synthase (Andhqs) in Complex with ZN2+ and Nad+, at 1.7D within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn1600

b:19.0
occ:1.00
NE2 A:HIS287 2.1 14.3 1.0
NE2 A:HIS271 2.2 18.6 1.0
OE2 A:GLU194 2.3 36.8 1.0
CD A:GLU194 2.9 31.9 1.0
CD2 A:HIS287 3.0 15.7 1.0
CD2 A:HIS271 3.0 12.3 1.0
OE1 A:GLU194 3.1 18.7 1.0
CE1 A:HIS287 3.2 20.8 1.0
CE1 A:HIS271 3.3 24.6 1.0
OD2 A:ASP146 3.9 29.0 1.0
O A:HOH1775 3.9 32.3 1.0
CG A:HIS287 4.2 21.3 1.0
CG A:GLU194 4.2 16.4 1.0
CG2 A:VAL291 4.2 14.9 1.0
ND1 A:HIS287 4.2 17.4 1.0
CG A:HIS271 4.3 15.0 1.0
O A:HOH1848 4.3 42.1 1.0
ND1 A:HIS271 4.3 14.4 1.0
C5N A:NAD1400 4.8 20.4 1.0
NZ A:LYS197 4.9 14.1 1.0

Zinc binding site 2 out of 2 in 1sg6

Go back to Zinc Binding Sites List in 1sg6
Zinc binding site 2 out of 2 in the Crystal Structure of Aspergillus Nidulans 3-Dehydroquinate Synthase (Andhqs) in Complex with ZN2+ and Nad+, at 1.7D


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Crystal Structure of Aspergillus Nidulans 3-Dehydroquinate Synthase (Andhqs) in Complex with ZN2+ and Nad+, at 1.7D within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Zn1601

b:13.5
occ:1.00
NE2 B:HIS271 2.1 15.2 1.0
OE2 B:GLU194 2.2 20.9 1.0
NE2 B:HIS287 2.2 12.5 1.0
CD B:GLU194 3.0 11.8 1.0
CD2 B:HIS287 3.0 9.5 1.0
CD2 B:HIS271 3.1 7.8 1.0
CE1 B:HIS271 3.1 14.5 1.0
OE1 B:GLU194 3.2 16.1 1.0
CE1 B:HIS287 3.3 12.8 1.0
O B:HOH2130 3.6 45.2 1.0
O B:HOH1718 3.9 20.1 1.0
CG2 B:VAL291 4.1 14.2 1.0
OD2 B:ASP146 4.2 36.2 1.0
ND1 B:HIS271 4.2 9.3 1.0
CG B:HIS271 4.2 13.1 1.0
CG B:HIS287 4.3 10.9 1.0
CG B:GLU194 4.3 8.3 1.0
ND1 B:HIS287 4.3 12.8 1.0
O B:HOH2265 4.4 62.9 1.0
O B:HOH2003 4.6 50.1 1.0
NZ B:LYS197 4.8 9.5 1.0

Reference:

C.E.Nichols, A.R.Hawkins, D.K.Stammers. Structure of the 'Open' Form of Aspergillus Nidulans 3-Dehydroquinate Synthase at 1.7 A Resolution From Crystals Grown Following Enzyme Turnover. Acta Crystallogr.,Sect.D V. 60 971 2004.
ISSN: ISSN 0907-4449
PubMed: 15103156
DOI: 10.1107/S0907444904004743
Page generated: Mon Jan 25 16:13:23 2021

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy