Zinc in PDB 1n18: Thermostable Mutant of Human Superoxide Dismutase, C6A, C111S
Enzymatic activity of Thermostable Mutant of Human Superoxide Dismutase, C6A, C111S
All present enzymatic activity of Thermostable Mutant of Human Superoxide Dismutase, C6A, C111S:
1.15.1.1;
Protein crystallography data
The structure of Thermostable Mutant of Human Superoxide Dismutase, C6A, C111S, PDB code: 1n18
was solved by
R.M.F.Cardoso,
M.M.Thayer,
M.Didonato,
T.P.Lo,
C.K.Bruns,
E.D.Getzoff,
J.A.Tainer,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
|
Resolution Low / High (Å)
|
19.86 /
2.00
|
|
Space group
|
C 2 2 21
|
|
Cell size a, b, c (Å), α, β, γ (°)
|
203.200,
165.200,
144.300,
90.00,
90.00,
90.00
|
|
R / Rfree (%)
|
21.8 /
25
|
Other elements in 1n18:
The structure of Thermostable Mutant of Human Superoxide Dismutase, C6A, C111S also contains other interesting chemical elements:
Zinc Binding Sites:
The binding sites of Zinc atom in the Thermostable Mutant of Human Superoxide Dismutase, C6A, C111S
(pdb code 1n18). This binding sites where shown within
5.0 Angstroms radius around Zinc atom.
In total 10 binding sites of Zinc where determined in the
Thermostable Mutant of Human Superoxide Dismutase, C6A, C111S, PDB code: 1n18:
Jump to Zinc binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
9;
10;
Zinc binding site 1 out
of 10 in 1n18
Go back to
Zinc Binding Sites List in 1n18
Zinc binding site 1 out
of 10 in the Thermostable Mutant of Human Superoxide Dismutase, C6A, C111S
 Mono view
 Stereo pair view
|
|
A full contact list of Zinc with other atoms in the Zn binding
site number 1 of Thermostable Mutant of Human Superoxide Dismutase, C6A, C111S within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Zn155
b:33.1
occ:1.00
|
OD1
|
A:ASP83
|
1.9
|
26.7
|
1.0
|
|
ND1
|
A:HIS63
|
2.0
|
28.5
|
1.0
|
|
ND1
|
A:HIS71
|
2.0
|
40.0
|
1.0
|
|
ND1
|
A:HIS80
|
2.1
|
32.1
|
1.0
|
|
CG
|
A:ASP83
|
2.7
|
30.2
|
1.0
|
|
OD2
|
A:ASP83
|
2.9
|
31.6
|
1.0
|
|
CE1
|
A:HIS71
|
2.9
|
40.0
|
1.0
|
|
CE1
|
A:HIS80
|
3.0
|
32.9
|
1.0
|
|
CE1
|
A:HIS63
|
3.0
|
28.0
|
1.0
|
|
CG
|
A:HIS63
|
3.0
|
27.3
|
1.0
|
|
CG
|
A:HIS80
|
3.1
|
33.7
|
1.0
|
|
CG
|
A:HIS71
|
3.1
|
39.3
|
1.0
|
|
CB
|
A:HIS63
|
3.3
|
25.2
|
1.0
|
|
CB
|
A:HIS80
|
3.5
|
33.5
|
1.0
|
|
CB
|
A:HIS71
|
3.5
|
39.2
|
1.0
|
|
O
|
A:LYS136
|
3.8
|
42.4
|
1.0
|
|
CA
|
A:HIS71
|
3.9
|
39.3
|
1.0
|
|
NE2
|
A:HIS71
|
4.1
|
39.6
|
1.0
|
|
NE2
|
A:HIS80
|
4.1
|
31.9
|
1.0
|
|
NE2
|
A:HIS63
|
4.1
|
31.0
|
1.0
|
|
CD2
|
A:HIS63
|
4.1
|
28.4
|
1.0
|
|
CB
|
A:ASP83
|
4.1
|
27.7
|
1.0
|
|
CD2
|
A:HIS80
|
4.2
|
31.5
|
1.0
|
|
CD2
|
A:HIS71
|
4.2
|
39.7
|
1.0
|
|
N
|
A:GLY72
|
4.7
|
37.8
|
1.0
|
|
CA
|
A:ASP83
|
4.7
|
29.3
|
1.0
|
|
O
|
A:HOH203
|
4.7
|
29.8
|
1.0
|
|
CA
|
A:HIS80
|
4.7
|
35.6
|
1.0
|
|
N
|
A:HIS80
|
4.8
|
37.4
|
1.0
|
|
C
|
A:HIS71
|
4.8
|
38.3
|
1.0
|
|
C
|
A:LYS136
|
4.8
|
43.4
|
1.0
|
|
CA
|
A:HIS63
|
4.9
|
24.9
|
1.0
|
|
N
|
A:ASP83
|
4.9
|
28.9
|
1.0
|
|
N
|
A:HIS71
|
4.9
|
38.6
|
1.0
|
|
Zinc binding site 2 out
of 10 in 1n18
Go back to
Zinc Binding Sites List in 1n18
Zinc binding site 2 out
of 10 in the Thermostable Mutant of Human Superoxide Dismutase, C6A, C111S
 Mono view
 Stereo pair view
|
|
A full contact list of Zinc with other atoms in the Zn binding
site number 2 of Thermostable Mutant of Human Superoxide Dismutase, C6A, C111S within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Zn155
b:22.6
occ:1.00
|
OD1
|
B:ASP83
|
2.0
|
21.5
|
1.0
|
|
ND1
|
B:HIS63
|
2.0
|
19.6
|
1.0
|
|
ND1
|
B:HIS71
|
2.0
|
17.7
|
1.0
|
|
ND1
|
B:HIS80
|
2.1
|
22.8
|
1.0
|
|
CG
|
B:ASP83
|
2.8
|
23.9
|
1.0
|
|
CE1
|
B:HIS71
|
2.9
|
20.8
|
1.0
|
|
CE1
|
B:HIS63
|
2.9
|
19.5
|
1.0
|
|
OD2
|
B:ASP83
|
3.0
|
22.6
|
1.0
|
|
CE1
|
B:HIS80
|
3.0
|
23.2
|
1.0
|
|
CG
|
B:HIS63
|
3.1
|
21.3
|
1.0
|
|
CG
|
B:HIS80
|
3.1
|
21.4
|
1.0
|
|
CG
|
B:HIS71
|
3.1
|
21.6
|
1.0
|
|
CB
|
B:HIS63
|
3.5
|
22.1
|
1.0
|
|
CB
|
B:HIS80
|
3.5
|
20.4
|
1.0
|
|
CB
|
B:HIS71
|
3.6
|
21.6
|
1.0
|
|
O
|
B:LYS136
|
3.9
|
26.9
|
1.0
|
|
CA
|
B:HIS71
|
3.9
|
22.4
|
1.0
|
|
NE2
|
B:HIS71
|
4.0
|
18.1
|
1.0
|
|
NE2
|
B:HIS63
|
4.1
|
22.1
|
1.0
|
|
NE2
|
B:HIS80
|
4.1
|
21.2
|
1.0
|
|
CD2
|
B:HIS63
|
4.2
|
21.0
|
1.0
|
|
CD2
|
B:HIS80
|
4.2
|
21.5
|
1.0
|
|
CD2
|
B:HIS71
|
4.2
|
19.6
|
1.0
|
|
CB
|
B:ASP83
|
4.2
|
20.9
|
1.0
|
|
CA
|
B:ASP83
|
4.7
|
19.6
|
1.0
|
|
O
|
B:HOH188
|
4.7
|
25.5
|
1.0
|
|
N
|
B:GLY72
|
4.7
|
19.8
|
1.0
|
|
N
|
B:HIS80
|
4.8
|
21.5
|
1.0
|
|
CA
|
B:HIS80
|
4.8
|
21.2
|
1.0
|
|
C
|
B:LYS136
|
4.8
|
26.6
|
1.0
|
|
C
|
B:HIS71
|
4.9
|
22.2
|
1.0
|
|
N
|
B:ASP83
|
4.9
|
19.3
|
1.0
|
|
N
|
B:HIS71
|
5.0
|
21.9
|
1.0
|
|
CA
|
B:HIS63
|
5.0
|
23.6
|
1.0
|
|
Zinc binding site 3 out
of 10 in 1n18
Go back to
Zinc Binding Sites List in 1n18
Zinc binding site 3 out
of 10 in the Thermostable Mutant of Human Superoxide Dismutase, C6A, C111S
 Mono view
 Stereo pair view
|
|
A full contact list of Zinc with other atoms in the Zn binding
site number 3 of Thermostable Mutant of Human Superoxide Dismutase, C6A, C111S within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Zn155
b:41.4
occ:1.00
|
OD1
|
C:ASP83
|
1.8
|
39.0
|
1.0
|
|
ND1
|
C:HIS71
|
2.1
|
41.4
|
1.0
|
|
ND1
|
C:HIS80
|
2.1
|
31.9
|
1.0
|
|
ND1
|
C:HIS63
|
2.4
|
44.5
|
1.0
|
|
CG
|
C:ASP83
|
2.6
|
35.5
|
1.0
|
|
CE1
|
C:HIS71
|
2.8
|
41.9
|
1.0
|
|
OD2
|
C:ASP83
|
2.9
|
34.7
|
1.0
|
|
CG
|
C:HIS80
|
3.0
|
36.9
|
1.0
|
|
CE1
|
C:HIS80
|
3.0
|
32.4
|
1.0
|
|
CG
|
C:HIS71
|
3.2
|
41.5
|
1.0
|
|
CG
|
C:HIS63
|
3.2
|
44.5
|
1.0
|
|
CB
|
C:HIS80
|
3.4
|
34.9
|
1.0
|
|
CE1
|
C:HIS63
|
3.4
|
47.1
|
1.0
|
|
CB
|
C:HIS63
|
3.4
|
41.7
|
1.0
|
|
CB
|
C:HIS71
|
3.7
|
41.5
|
1.0
|
|
CA
|
C:HIS71
|
4.0
|
43.4
|
1.0
|
|
NE2
|
C:HIS71
|
4.0
|
41.1
|
1.0
|
|
O
|
C:LYS136
|
4.1
|
46.9
|
1.0
|
|
CB
|
C:ASP83
|
4.1
|
35.0
|
1.0
|
|
NE2
|
C:HIS80
|
4.1
|
34.7
|
1.0
|
|
CD2
|
C:HIS80
|
4.1
|
34.5
|
1.0
|
|
CD2
|
C:HIS71
|
4.2
|
41.1
|
1.0
|
|
CD2
|
C:HIS63
|
4.4
|
47.0
|
1.0
|
|
NE2
|
C:HIS63
|
4.4
|
47.0
|
1.0
|
|
N
|
C:GLY72
|
4.6
|
42.4
|
1.0
|
|
CA
|
C:ASP83
|
4.6
|
34.2
|
1.0
|
|
CA
|
C:HIS80
|
4.6
|
36.5
|
1.0
|
|
N
|
C:HIS80
|
4.7
|
39.9
|
1.0
|
|
N
|
C:ASP83
|
4.8
|
35.2
|
1.0
|
|
C
|
C:HIS71
|
4.9
|
43.5
|
1.0
|
|
CA
|
C:HIS63
|
5.0
|
38.4
|
1.0
|
|
Zinc binding site 4 out
of 10 in 1n18
Go back to
Zinc Binding Sites List in 1n18
Zinc binding site 4 out
of 10 in the Thermostable Mutant of Human Superoxide Dismutase, C6A, C111S
 Mono view
 Stereo pair view
|
|
A full contact list of Zinc with other atoms in the Zn binding
site number 4 of Thermostable Mutant of Human Superoxide Dismutase, C6A, C111S within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Zn155
b:22.5
occ:1.00
|
OD1
|
D:ASP83
|
1.9
|
20.3
|
1.0
|
|
ND1
|
D:HIS63
|
2.0
|
23.1
|
1.0
|
|
ND1
|
D:HIS71
|
2.0
|
20.5
|
1.0
|
|
ND1
|
D:HIS80
|
2.0
|
22.8
|
1.0
|
|
CG
|
D:ASP83
|
2.7
|
18.1
|
1.0
|
|
CE1
|
D:HIS71
|
2.8
|
19.7
|
1.0
|
|
OD2
|
D:ASP83
|
2.8
|
19.0
|
1.0
|
|
CE1
|
D:HIS63
|
2.9
|
23.9
|
1.0
|
|
CE1
|
D:HIS80
|
2.9
|
22.5
|
1.0
|
|
CG
|
D:HIS63
|
3.0
|
24.4
|
1.0
|
|
CG
|
D:HIS80
|
3.0
|
22.1
|
1.0
|
|
CG
|
D:HIS71
|
3.1
|
22.0
|
1.0
|
|
CB
|
D:HIS63
|
3.4
|
23.3
|
1.0
|
|
CB
|
D:HIS80
|
3.5
|
22.2
|
1.0
|
|
CB
|
D:HIS71
|
3.6
|
22.8
|
1.0
|
|
O
|
D:LYS136
|
3.8
|
25.2
|
1.0
|
|
CA
|
D:HIS71
|
4.0
|
23.9
|
1.0
|
|
NE2
|
D:HIS71
|
4.0
|
19.6
|
1.0
|
|
NE2
|
D:HIS63
|
4.0
|
27.1
|
1.0
|
|
NE2
|
D:HIS80
|
4.0
|
23.3
|
1.0
|
|
CD2
|
D:HIS63
|
4.1
|
25.1
|
1.0
|
|
CD2
|
D:HIS80
|
4.1
|
21.9
|
1.0
|
|
CB
|
D:ASP83
|
4.1
|
19.6
|
1.0
|
|
CD2
|
D:HIS71
|
4.2
|
19.3
|
1.0
|
|
CA
|
D:ASP83
|
4.7
|
20.7
|
1.0
|
|
CA
|
D:HIS80
|
4.7
|
23.0
|
1.0
|
|
N
|
D:GLY72
|
4.7
|
23.9
|
1.0
|
|
N
|
D:HIS80
|
4.8
|
22.9
|
1.0
|
|
C
|
D:LYS136
|
4.8
|
24.7
|
1.0
|
|
O
|
D:HOH1442
|
4.8
|
27.2
|
1.0
|
|
N
|
D:ASP83
|
4.9
|
21.0
|
1.0
|
|
C
|
D:HIS71
|
4.9
|
24.3
|
1.0
|
|
CA
|
D:HIS63
|
5.0
|
24.2
|
1.0
|
|
Zinc binding site 5 out
of 10 in 1n18
Go back to
Zinc Binding Sites List in 1n18
Zinc binding site 5 out
of 10 in the Thermostable Mutant of Human Superoxide Dismutase, C6A, C111S
 Mono view
 Stereo pair view
|
|
A full contact list of Zinc with other atoms in the Zn binding
site number 5 of Thermostable Mutant of Human Superoxide Dismutase, C6A, C111S within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
E:Zn155
b:24.3
occ:1.00
|
OD1
|
E:ASP83
|
1.9
|
21.7
|
1.0
|
|
ND1
|
E:HIS80
|
2.0
|
24.8
|
1.0
|
|
ND1
|
E:HIS63
|
2.1
|
22.9
|
1.0
|
|
ND1
|
E:HIS71
|
2.1
|
26.6
|
1.0
|
|
CG
|
E:ASP83
|
2.8
|
23.0
|
1.0
|
|
CE1
|
E:HIS80
|
2.9
|
25.6
|
1.0
|
|
CE1
|
E:HIS71
|
3.0
|
25.4
|
1.0
|
|
CG
|
E:HIS80
|
3.0
|
25.6
|
1.0
|
|
OD2
|
E:ASP83
|
3.0
|
22.1
|
1.0
|
|
CG
|
E:HIS63
|
3.0
|
22.1
|
1.0
|
|
CE1
|
E:HIS63
|
3.0
|
18.5
|
1.0
|
|
CG
|
E:HIS71
|
3.2
|
25.3
|
1.0
|
|
CB
|
E:HIS63
|
3.4
|
20.4
|
1.0
|
|
CB
|
E:HIS80
|
3.4
|
24.4
|
1.0
|
|
CB
|
E:HIS71
|
3.6
|
25.9
|
1.0
|
|
O
|
E:LYS136
|
3.7
|
27.6
|
1.0
|
|
CA
|
E:HIS71
|
4.0
|
26.9
|
1.0
|
|
NE2
|
E:HIS80
|
4.0
|
24.8
|
1.0
|
|
CD2
|
E:HIS80
|
4.1
|
25.0
|
1.0
|
|
NE2
|
E:HIS71
|
4.1
|
25.7
|
1.0
|
|
NE2
|
E:HIS63
|
4.2
|
23.1
|
1.0
|
|
CB
|
E:ASP83
|
4.2
|
21.1
|
1.0
|
|
CD2
|
E:HIS63
|
4.2
|
21.3
|
1.0
|
|
CD2
|
E:HIS71
|
4.3
|
25.2
|
1.0
|
|
CA
|
E:ASP83
|
4.6
|
22.8
|
1.0
|
|
CA
|
E:HIS80
|
4.7
|
24.7
|
1.0
|
|
N
|
E:HIS80
|
4.7
|
26.1
|
1.0
|
|
O
|
E:HOH159
|
4.7
|
22.7
|
1.0
|
|
C
|
E:LYS136
|
4.8
|
28.7
|
1.0
|
|
N
|
E:GLY72
|
4.8
|
25.1
|
1.0
|
|
N
|
E:ASP83
|
4.8
|
22.2
|
1.0
|
|
CA
|
E:HIS63
|
4.9
|
22.1
|
1.0
|
|
C
|
E:HIS71
|
4.9
|
26.3
|
1.0
|
|
N
|
E:HIS71
|
5.0
|
27.9
|
1.0
|
|
Zinc binding site 6 out
of 10 in 1n18
Go back to
Zinc Binding Sites List in 1n18
Zinc binding site 6 out
of 10 in the Thermostable Mutant of Human Superoxide Dismutase, C6A, C111S
 Mono view
 Stereo pair view
|
|
A full contact list of Zinc with other atoms in the Zn binding
site number 6 of Thermostable Mutant of Human Superoxide Dismutase, C6A, C111S within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
F:Zn155
b:22.9
occ:1.00
|
OD1
|
F:ASP83
|
1.9
|
21.0
|
1.0
|
|
ND1
|
F:HIS80
|
2.1
|
21.4
|
1.0
|
|
ND1
|
F:HIS63
|
2.1
|
21.4
|
1.0
|
|
ND1
|
F:HIS71
|
2.1
|
22.0
|
1.0
|
|
CG
|
F:ASP83
|
2.8
|
22.0
|
1.0
|
|
OD2
|
F:ASP83
|
2.9
|
23.2
|
1.0
|
|
CE1
|
F:HIS71
|
2.9
|
21.2
|
1.0
|
|
CE1
|
F:HIS80
|
3.0
|
24.2
|
1.0
|
|
CG
|
F:HIS80
|
3.0
|
22.6
|
1.0
|
|
CE1
|
F:HIS63
|
3.0
|
20.1
|
1.0
|
|
CG
|
F:HIS63
|
3.1
|
21.8
|
1.0
|
|
CG
|
F:HIS71
|
3.2
|
19.9
|
1.0
|
|
CB
|
F:HIS63
|
3.4
|
22.8
|
1.0
|
|
CB
|
F:HIS80
|
3.4
|
21.5
|
1.0
|
|
CB
|
F:HIS71
|
3.6
|
20.4
|
1.0
|
|
O
|
F:LYS136
|
3.9
|
27.9
|
1.0
|
|
CA
|
F:HIS71
|
4.0
|
25.2
|
1.0
|
|
NE2
|
F:HIS80
|
4.1
|
23.4
|
1.0
|
|
CD2
|
F:HIS80
|
4.1
|
23.1
|
1.0
|
|
NE2
|
F:HIS71
|
4.1
|
20.2
|
1.0
|
|
NE2
|
F:HIS63
|
4.1
|
26.2
|
1.0
|
|
CB
|
F:ASP83
|
4.2
|
20.6
|
1.0
|
|
CD2
|
F:HIS63
|
4.2
|
23.9
|
1.0
|
|
CD2
|
F:HIS71
|
4.3
|
19.0
|
1.0
|
|
CA
|
F:HIS80
|
4.7
|
23.2
|
1.0
|
|
N
|
F:HIS80
|
4.7
|
24.0
|
1.0
|
|
CA
|
F:ASP83
|
4.7
|
20.4
|
1.0
|
|
N
|
F:GLY72
|
4.7
|
25.4
|
1.0
|
|
O
|
F:HOH179
|
4.9
|
26.8
|
1.0
|
|
C
|
F:LYS136
|
4.9
|
26.9
|
1.0
|
|
N
|
F:ASP83
|
4.9
|
20.3
|
1.0
|
|
C
|
F:HIS71
|
4.9
|
26.1
|
1.0
|
|
CA
|
F:HIS63
|
4.9
|
22.2
|
1.0
|
|
CD2
|
F:HIS46
|
5.0
|
20.1
|
1.0
|
|
N
|
F:HIS71
|
5.0
|
27.2
|
1.0
|
|
Zinc binding site 7 out
of 10 in 1n18
Go back to
Zinc Binding Sites List in 1n18
Zinc binding site 7 out
of 10 in the Thermostable Mutant of Human Superoxide Dismutase, C6A, C111S
 Mono view
 Stereo pair view
|
|
A full contact list of Zinc with other atoms in the Zn binding
site number 7 of Thermostable Mutant of Human Superoxide Dismutase, C6A, C111S within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
G:Zn155
b:45.8
occ:1.00
|
OD1
|
G:ASP83
|
1.9
|
42.0
|
1.0
|
|
ND1
|
G:HIS80
|
2.1
|
47.4
|
1.0
|
|
ND1
|
G:HIS71
|
2.1
|
52.1
|
1.0
|
|
ND1
|
G:HIS63
|
2.2
|
43.9
|
1.0
|
|
CG
|
G:ASP83
|
2.7
|
42.2
|
1.0
|
|
OD2
|
G:ASP83
|
2.9
|
38.8
|
1.0
|
|
CE1
|
G:HIS80
|
2.9
|
48.6
|
1.0
|
|
CG
|
G:HIS80
|
3.0
|
49.4
|
1.0
|
|
CE1
|
G:HIS71
|
3.0
|
53.5
|
1.0
|
|
CG
|
G:HIS63
|
3.1
|
43.8
|
1.0
|
|
CE1
|
G:HIS63
|
3.2
|
46.3
|
1.0
|
|
CG
|
G:HIS71
|
3.2
|
53.0
|
1.0
|
|
CB
|
G:HIS63
|
3.4
|
41.4
|
1.0
|
|
CB
|
G:HIS80
|
3.4
|
49.1
|
1.0
|
|
CB
|
G:HIS71
|
3.6
|
53.9
|
1.0
|
|
CA
|
G:HIS71
|
3.8
|
55.6
|
1.0
|
|
O
|
G:LYS136
|
3.9
|
56.5
|
1.0
|
|
NE2
|
G:HIS80
|
4.0
|
49.8
|
1.0
|
|
CD2
|
G:HIS80
|
4.0
|
49.2
|
1.0
|
|
CB
|
G:ASP83
|
4.2
|
42.0
|
1.0
|
|
NE2
|
G:HIS71
|
4.2
|
54.0
|
1.0
|
|
CD2
|
G:HIS63
|
4.3
|
45.5
|
1.0
|
|
NE2
|
G:HIS63
|
4.3
|
48.5
|
1.0
|
|
CD2
|
G:HIS71
|
4.3
|
52.8
|
1.0
|
|
N
|
G:GLY72
|
4.6
|
55.2
|
1.0
|
|
N
|
G:HIS80
|
4.7
|
50.5
|
1.0
|
|
CA
|
G:HIS80
|
4.7
|
48.8
|
1.0
|
|
CA
|
G:ASP83
|
4.7
|
41.9
|
1.0
|
|
C
|
G:HIS71
|
4.8
|
55.7
|
1.0
|
|
N
|
G:HIS71
|
4.8
|
57.0
|
1.0
|
|
N
|
G:ASP83
|
4.8
|
41.7
|
1.0
|
|
CD2
|
G:HIS46
|
4.8
|
46.8
|
1.0
|
|
C
|
G:LYS136
|
4.9
|
56.4
|
1.0
|
|
CA
|
G:HIS63
|
4.9
|
39.1
|
1.0
|
|
O
|
G:HOH245
|
5.0
|
48.8
|
1.0
|
|
Zinc binding site 8 out
of 10 in 1n18
Go back to
Zinc Binding Sites List in 1n18
Zinc binding site 8 out
of 10 in the Thermostable Mutant of Human Superoxide Dismutase, C6A, C111S
 Mono view
 Stereo pair view
|
|
A full contact list of Zinc with other atoms in the Zn binding
site number 8 of Thermostable Mutant of Human Superoxide Dismutase, C6A, C111S within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
H:Zn155
b:28.7
occ:1.00
|
OD1
|
H:ASP83
|
1.9
|
27.1
|
1.0
|
|
ND1
|
H:HIS63
|
2.0
|
31.3
|
1.0
|
|
ND1
|
H:HIS71
|
2.1
|
25.4
|
1.0
|
|
ND1
|
H:HIS80
|
2.1
|
34.3
|
1.0
|
|
CG
|
H:ASP83
|
2.7
|
28.5
|
1.0
|
|
OD2
|
H:ASP83
|
2.9
|
26.9
|
1.0
|
|
CE1
|
H:HIS80
|
2.9
|
34.9
|
1.0
|
|
CE1
|
H:HIS71
|
2.9
|
25.4
|
1.0
|
|
CE1
|
H:HIS63
|
3.0
|
31.0
|
1.0
|
|
CG
|
H:HIS80
|
3.0
|
33.0
|
1.0
|
|
CG
|
H:HIS63
|
3.0
|
30.5
|
1.0
|
|
CG
|
H:HIS71
|
3.1
|
28.8
|
1.0
|
|
CB
|
H:HIS63
|
3.4
|
30.7
|
1.0
|
|
CB
|
H:HIS80
|
3.4
|
31.7
|
1.0
|
|
CB
|
H:HIS71
|
3.6
|
29.0
|
1.0
|
|
NE2
|
H:HIS80
|
3.9
|
35.9
|
1.0
|
|
CA
|
H:HIS71
|
4.0
|
30.7
|
1.0
|
|
CD2
|
H:HIS80
|
4.0
|
33.8
|
1.0
|
|
O
|
H:LYS136
|
4.0
|
34.6
|
1.0
|
|
NE2
|
H:HIS63
|
4.1
|
32.6
|
1.0
|
|
NE2
|
H:HIS71
|
4.1
|
26.1
|
1.0
|
|
CB
|
H:ASP83
|
4.1
|
27.0
|
1.0
|
|
CD2
|
H:HIS63
|
4.1
|
31.3
|
1.0
|
|
CD2
|
H:HIS71
|
4.2
|
27.7
|
1.0
|
|
N
|
H:HIS80
|
4.6
|
31.8
|
1.0
|
|
CA
|
H:ASP83
|
4.6
|
27.0
|
1.0
|
|
CA
|
H:HIS80
|
4.6
|
30.9
|
1.0
|
|
N
|
H:GLY72
|
4.8
|
31.0
|
1.0
|
|
N
|
H:ASP83
|
4.8
|
27.6
|
1.0
|
|
O
|
H:HOH172
|
4.9
|
33.3
|
1.0
|
|
CA
|
H:HIS63
|
4.9
|
32.2
|
1.0
|
|
N
|
H:HIS71
|
4.9
|
33.5
|
1.0
|
|
C
|
H:HIS71
|
4.9
|
32.5
|
1.0
|
|
C
|
H:LYS136
|
5.0
|
34.7
|
1.0
|
|
Zinc binding site 9 out
of 10 in 1n18
Go back to
Zinc Binding Sites List in 1n18
Zinc binding site 9 out
of 10 in the Thermostable Mutant of Human Superoxide Dismutase, C6A, C111S
 Mono view
 Stereo pair view
|
|
A full contact list of Zinc with other atoms in the Zn binding
site number 9 of Thermostable Mutant of Human Superoxide Dismutase, C6A, C111S within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
I:Zn155
b:40.5
occ:1.00
|
ND1
|
I:HIS71
|
2.0
|
47.7
|
1.0
|
|
OD1
|
I:ASP83
|
2.0
|
41.7
|
1.0
|
|
ND1
|
I:HIS63
|
2.1
|
39.7
|
1.0
|
|
ND1
|
I:HIS80
|
2.1
|
40.9
|
1.0
|
|
CE1
|
I:HIS71
|
2.7
|
48.4
|
1.0
|
|
CG
|
I:ASP83
|
2.8
|
41.3
|
1.0
|
|
CE1
|
I:HIS80
|
2.9
|
40.7
|
1.0
|
|
OD2
|
I:ASP83
|
3.0
|
43.8
|
1.0
|
|
CE1
|
I:HIS63
|
3.1
|
39.3
|
1.0
|
|
CG
|
I:HIS80
|
3.1
|
41.5
|
1.0
|
|
CG
|
I:HIS63
|
3.1
|
40.1
|
1.0
|
|
CG
|
I:HIS71
|
3.1
|
48.3
|
1.0
|
|
CB
|
I:HIS63
|
3.4
|
41.0
|
1.0
|
|
CB
|
I:HIS80
|
3.6
|
42.2
|
1.0
|
|
CB
|
I:HIS71
|
3.7
|
47.4
|
1.0
|
|
NE2
|
I:HIS71
|
3.9
|
47.8
|
1.0
|
|
NE2
|
I:HIS80
|
4.0
|
42.0
|
1.0
|
|
O
|
I:LYS136
|
4.0
|
49.2
|
1.0
|
|
CD2
|
I:HIS80
|
4.1
|
41.0
|
1.0
|
|
CA
|
I:HIS71
|
4.1
|
48.0
|
1.0
|
|
CD2
|
I:HIS71
|
4.1
|
48.0
|
1.0
|
|
NE2
|
I:HIS63
|
4.2
|
40.0
|
1.0
|
|
CD2
|
I:HIS63
|
4.2
|
39.1
|
1.0
|
|
CB
|
I:ASP83
|
4.2
|
39.1
|
1.0
|
|
CD2
|
I:HIS46
|
4.7
|
36.0
|
1.0
|
|
CA
|
I:ASP83
|
4.7
|
38.4
|
1.0
|
|
N
|
I:GLY72
|
4.7
|
46.8
|
1.0
|
|
N
|
I:HIS80
|
4.8
|
45.4
|
1.0
|
|
CA
|
I:HIS80
|
4.8
|
43.5
|
1.0
|
|
CA
|
I:HIS63
|
5.0
|
42.2
|
1.0
|
|
C
|
I:LYS136
|
5.0
|
49.1
|
1.0
|
|
N
|
I:ASP83
|
5.0
|
36.3
|
1.0
|
|
C
|
I:HIS71
|
5.0
|
47.2
|
1.0
|
|
Zinc binding site 10 out
of 10 in 1n18
Go back to
Zinc Binding Sites List in 1n18
Zinc binding site 10 out
of 10 in the Thermostable Mutant of Human Superoxide Dismutase, C6A, C111S
 Mono view
 Stereo pair view
|
|
A full contact list of Zinc with other atoms in the Zn binding
site number 10 of Thermostable Mutant of Human Superoxide Dismutase, C6A, C111S within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
J:Zn155
b:31.5
occ:1.00
|
OD1
|
J:ASP83
|
1.9
|
33.8
|
1.0
|
|
ND1
|
J:HIS71
|
2.0
|
34.4
|
1.0
|
|
ND1
|
J:HIS63
|
2.0
|
34.8
|
1.0
|
|
ND1
|
J:HIS80
|
2.0
|
28.0
|
1.0
|
|
CG
|
J:ASP83
|
2.8
|
31.3
|
1.0
|
|
CE1
|
J:HIS71
|
2.8
|
33.9
|
1.0
|
|
CE1
|
J:HIS80
|
2.9
|
26.9
|
1.0
|
|
OD2
|
J:ASP83
|
2.9
|
29.6
|
1.0
|
|
CE1
|
J:HIS63
|
3.0
|
32.4
|
1.0
|
|
CG
|
J:HIS80
|
3.0
|
30.9
|
1.0
|
|
CG
|
J:HIS63
|
3.0
|
31.5
|
1.0
|
|
CG
|
J:HIS71
|
3.1
|
33.0
|
1.0
|
|
CB
|
J:HIS63
|
3.4
|
33.0
|
1.0
|
|
CB
|
J:HIS80
|
3.5
|
31.4
|
1.0
|
|
CB
|
J:HIS71
|
3.6
|
32.2
|
1.0
|
|
O
|
J:LYS136
|
3.8
|
32.6
|
1.0
|
|
NE2
|
J:HIS71
|
4.0
|
31.9
|
1.0
|
|
NE2
|
J:HIS80
|
4.0
|
27.5
|
1.0
|
|
CA
|
J:HIS71
|
4.0
|
33.2
|
1.0
|
|
CD2
|
J:HIS80
|
4.1
|
29.5
|
1.0
|
|
NE2
|
J:HIS63
|
4.1
|
32.1
|
1.0
|
|
CD2
|
J:HIS71
|
4.1
|
32.7
|
1.0
|
|
CD2
|
J:HIS63
|
4.2
|
34.0
|
1.0
|
|
CB
|
J:ASP83
|
4.2
|
31.9
|
1.0
|
|
CA
|
J:ASP83
|
4.7
|
31.8
|
1.0
|
|
N
|
J:HIS80
|
4.7
|
35.6
|
1.0
|
|
CA
|
J:HIS80
|
4.7
|
33.5
|
1.0
|
|
C
|
J:LYS136
|
4.7
|
32.9
|
1.0
|
|
N
|
J:GLY72
|
4.7
|
31.4
|
1.0
|
|
O
|
J:HOH163
|
4.8
|
33.0
|
1.0
|
|
N
|
J:ASP83
|
4.8
|
31.1
|
1.0
|
|
CD2
|
J:HIS46
|
4.9
|
32.0
|
1.0
|
|
CA
|
J:HIS63
|
4.9
|
33.1
|
1.0
|
|
C
|
J:HIS71
|
5.0
|
32.4
|
1.0
|
|
Reference:
R.M.F.Cardoso,
M.M.Thayer,
M.Didonato,
T.P.Lo,
C.K.Bruns,
E.D.Getzoff,
J.A.Tainer.
Insights Into Lou Gehrig'S Disease From the Structure and Instability of the A4V Mutant of Human Cu,Zn Superoxide Dismutase. J.Mol.Biol. V. 324 247 2002.
ISSN: ISSN 0022-2836
PubMed: 12441104
DOI: 10.1016/S0022-2836(02)01090-2
Page generated: Mon Jan 25 16:10:18 2021
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