Zinc in PDB 1m3v: FLIN4: Fusion of the Lim Binding Domain of LDB1 and the N- Terminal Lim Domain of LMO4

The binding sites of Zinc atom in the FLIN4: Fusion of the Lim Binding Domain of LDB1 and the N- Terminal Lim Domain of LMO4 (pdb code 1m3v). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the FLIN4: Fusion of the Lim Binding Domain of LDB1 and the N- Terminal Lim Domain of LMO4, PDB code: 1m3v:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the FLIN4: Fusion of the Lim Binding Domain of LDB1 and the N- Terminal Lim Domain of LMO4


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of FLIN4: Fusion of the Lim Binding Domain of LDB1 and the N- Terminal Lim Domain of LMO4 within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn123 b:0.0 occ:1.00 ND1 A:HIS29 2.0 0.0 1.0 SG A:CYS8 2.3 0.0 1.0 SG A:CYS11 2.3 0.0 1.0 SG A:CYS32 2.3 0.0 1.0 HB2 A:HIS29 2.7 0.0 1.0 H A:CYS11 2.9 0.0 1.0 CE1 A:HIS29 3.0 0.0 1.0 CG A:HIS29 3.0 0.0 1.0 HE1 A:HIS29 3.2 0.0 1.0 HB3 A:CYS11 3.2 0.0 1.0 HB3 A:CYS8 3.3 0.0 1.0 CB A:CYS32 3.3 0.0 1.0 HB2 A:CYS32 3.3 0.0 1.0 CB A:CYS11 3.3 0.0 1.0 CB A:CYS8 3.3 0.0 1.0 CB A:HIS29 3.4 0.0 1.0 HB3 A:CYS32 3.4 0.0 1.0 N A:CYS11 3.5 0.0 1.0 H A:HIS29 3.5 0.0 1.0 HB2 A:CYS8 3.6 0.0 1.0 HA3 A:GLY10 3.8 0.0 1.0 N A:HIS29 3.8 0.0 1.0 CA A:CYS11 4.0 0.0 1.0 NE2 A:HIS29 4.1 0.0 1.0 CD2 A:HIS29 4.1 0.0 1.0 H A:GLY10 4.2 0.0 1.0 CA A:HIS29 4.2 0.0 1.0 HB3 A:HIS29 4.2 0.0 1.0 HB2 A:CYS11 4.2 0.0 1.0 C A:GLY10 4.2 0.0 1.0 HD12 A:ILE15 4.3 0.0 1.0 HA A:TRP28 4.3 0.0 1.0 CA A:GLY10 4.4 0.0 1.0 HG12 A:ILE15 4.6 0.0 1.0 H A:GLY12 4.6 0.0 1.0 C A:TRP28 4.6 0.0 1.0 N A:GLY10 4.7 0.0 1.0 CA A:CYS8 4.8 0.0 1.0 CA A:CYS32 4.8 0.0 1.0 HA A:HIS29 4.8 0.0 1.0 HA A:CYS11 4.8 0.0 1.0 C A:CYS11 5.0 0.0 1.0 HE2 A:HIS29 5.0 0.0 1.0

Zinc binding site 2 out of 2 in the FLIN4: Fusion of the Lim Binding Domain of LDB1 and the N- Terminal Lim Domain of LMO4


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of FLIN4: Fusion of the Lim Binding Domain of LDB1 and the N- Terminal Lim Domain of LMO4 within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn124 b:0.0 occ:1.00 OD2 A:ASP61 2.0 0.0 1.0 SG A:CYS35 2.3 0.0 1.0 SG A:CYS58 2.3 0.0 1.0 SG A:CYS38 2.3 0.0 1.0 CG A:ASP61 2.9 0.0 1.0 HB3 A:CYS35 3.0 0.0 1.0 HB3 A:CYS58 3.1 0.0 1.0 HB2 A:CYS38 3.1 0.0 1.0 CB A:CYS35 3.2 0.0 1.0 HB2 A:ASP61 3.3 0.0 1.0 H A:CYS38 3.3 0.0 1.0 CB A:CYS38 3.3 0.0 1.0 CB A:CYS58 3.3 0.0 1.0 H A:CYS58 3.4 0.0 1.0 H A:ASP61 3.5 0.0 1.0 CB A:ASP61 3.6 0.0 1.0 HD21 A:ASN60 3.7 0.0 1.0 OD1 A:ASP61 3.7 0.0 1.0 H A:SER36 3.7 0.0 1.0 HB2 A:CYS35 4.0 0.0 1.0 HB2 A:CYS58 4.1 0.0 1.0 N A:CYS38 4.1 0.0 1.0 HB3 A:CYS38 4.1 0.0 1.0 HA A:CYS35 4.1 0.0 1.0 H A:GLN39 4.1 0.0 1.0 N A:ASP61 4.1 0.0 1.0 HB3 A:ASN60 4.1 0.0 1.0 N A:CYS58 4.2 0.0 1.0 H A:SER37 4.2 0.0 1.0 H A:ALA40 4.2 0.0 1.0 CA A:CYS38 4.3 0.0 1.0 CA A:CYS35 4.3 0.0 1.0 CA A:ASP61 4.3 0.0 1.0 CA A:CYS58 4.4 0.0 1.0 HD11 A:LEU42 4.4 0.0 1.0 HA A:ASP61 4.5 0.0 1.0 HB3 A:ASP61 4.5 0.0 1.0 ND2 A:ASN60 4.6 0.0 1.0 N A:SER36 4.6 0.0 1.0 HB3 A:ALA40 4.6 0.0 1.0 HD12 A:LEU42 4.7 0.0 1.0 N A:GLN39 4.8 0.0 1.0 HB2 A:ALA40 4.8 0.0 1.0 HA A:LEU57 5.0 0.0 1.0 N A:SER37 5.0 0.0 1.0 CD1 A:LEU42 5.0 0.0 1.0

J.E.Deane, J.P.Mackay, A.H.Kwan, E.Y.Sum, J.E.Visvader, J.M.Matthews. Structural Basis For the Recognition of LDB1 By the N-Terminal Lim Domains of LMO2 and LMO4 Embo J. V. 22 2224 2003.
ISSN: ISSN 0261-4189
PubMed: 12727888
DOI: 10.1093/EMBOJ/CDG196