Zinc in PDB 1lhn: Crystal Structure of the N-Terminal Lg-Domain of Shbg in Complex with 5ALPHA-Androstane-3BETA,17ALPHA-Diol

The structure of Crystal Structure of the N-Terminal Lg-Domain of Shbg in Complex with 5ALPHA-Androstane-3BETA,17ALPHA-Diol, PDB code: 1lhn was solved by I.Grishkovskaya, G.V.Avvakumov, G.L.Hammond, M.G.Catalano, Y.A.Muller, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	19.09 / 2.00
Space group	H 3 2
Cell size a, b, c (Å), α, β, γ (°)	103.900, 103.900, 84.480, 90.00, 90.00, 120.00
R / Rfree (%)	19.8 / 23.9

The structure of Crystal Structure of the N-Terminal Lg-Domain of Shbg in Complex with 5ALPHA-Androstane-3BETA,17ALPHA-Diol also contains other interesting chemical elements:

Calcium

(Ca)

1 atom

The binding sites of Zinc atom in the Crystal Structure of the N-Terminal Lg-Domain of Shbg in Complex with 5ALPHA-Androstane-3BETA,17ALPHA-Diol (pdb code 1lhn). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of the N-Terminal Lg-Domain of Shbg in Complex with 5ALPHA-Androstane-3BETA,17ALPHA-Diol, PDB code: 1lhn:

Zinc binding site 1 out of 1 in the Crystal Structure of the N-Terminal Lg-Domain of Shbg in Complex with 5ALPHA-Androstane-3BETA,17ALPHA-Diol


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of the N-Terminal Lg-Domain of Shbg in Complex with 5ALPHA-Androstane-3BETA,17ALPHA-Diol within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn501 b:51.9 occ:0.50 O A:HOH537 2.1 50.9 1.0 NE2 A:HIS136 2.2 63.3 1.0 NE2 A:HIS83 2.4 50.4 1.0 CD2 A:HIS136 2.4 62.2 1.0 OD1 A:ASP65 2.6 43.3 1.0 CD2 A:HIS83 3.0 49.8 1.0 O A:HOH587 3.4 58.7 1.0 CE1 A:HIS136 3.5 62.7 1.0 CE1 A:HIS83 3.5 50.2 1.0 CG A:ASP65 3.6 41.7 1.0 OD1 A:ASP64 3.7 51.8 1.0 CG A:HIS136 3.8 61.7 1.0 CB A:ASP65 4.1 38.4 1.0 CG A:HIS83 4.2 46.8 1.0 ND1 A:HIS136 4.2 62.2 1.0 ND1 A:HIS83 4.4 48.4 1.0 OD2 A:ASP65 4.5 44.9 1.0 OG1 A:THR60 4.7 42.3 1.0 CG A:ASP64 4.8 51.0 1.0 O A:ASP64 4.9 39.2 1.0 CB A:HIS136 5.0 59.2 1.0

I.Grishkovskaya, G.V.Avvakumov, G.L.Hammond, M.G.Catalano, Y.A.Muller. Steroid Ligands Bind Human Sex Hormone-Binding Globulin in Specific Orientations and Produce Distinct Changes in Protein Conformation J.Biol.Chem. V. 277 32086 2002.
ISSN: ISSN 0021-9258
PubMed: 12065592
DOI: 10.1074/JBC.M203999200