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Zinc in PDB 1jqw: The 2.3 Angstrom Resolution Structure of Bacillus Subtilis Luxs/Homocysteine Complex

Enzymatic activity of The 2.3 Angstrom Resolution Structure of Bacillus Subtilis Luxs/Homocysteine Complex

All present enzymatic activity of The 2.3 Angstrom Resolution Structure of Bacillus Subtilis Luxs/Homocysteine Complex:
4.4.1.21;

Protein crystallography data

The structure of The 2.3 Angstrom Resolution Structure of Bacillus Subtilis Luxs/Homocysteine Complex, PDB code: 1jqw was solved by S.N.Ruzheinikov, S.K.Das, S.E.Sedelnikova, A.Hartley, S.J.Foster, M.J.Horsburgh, A.G.Cox, C.W.Mccleod, A.Mekhalfia, G.M.Blackburn, D.W.Rice, P.J.Baker, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 10.00 / 2.30
Space group P 65 2 2
Cell size a, b, c (Å), α, β, γ (°) 61.202, 61.202, 150.030, 90.00, 90.00, 120.00
R / Rfree (%) 17.5 / 24.1

Zinc Binding Sites:

The binding sites of Zinc atom in the The 2.3 Angstrom Resolution Structure of Bacillus Subtilis Luxs/Homocysteine Complex (pdb code 1jqw). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the The 2.3 Angstrom Resolution Structure of Bacillus Subtilis Luxs/Homocysteine Complex, PDB code: 1jqw:

Zinc binding site 1 out of 1 in 1jqw

Go back to Zinc Binding Sites List in 1jqw
Zinc binding site 1 out of 1 in the The 2.3 Angstrom Resolution Structure of Bacillus Subtilis Luxs/Homocysteine Complex


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of The 2.3 Angstrom Resolution Structure of Bacillus Subtilis Luxs/Homocysteine Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn300

b:63.4
occ:0.50
NE2 A:HIS54 2.2 34.9 1.0
SG A:CYS126 2.3 62.6 1.0
NE2 A:HIS58 2.3 75.0 1.0
CE1 A:HIS54 2.9 35.6 1.0
CE1 A:HIS58 3.1 71.4 1.0
CD2 A:HIS54 3.4 35.0 1.0
CD2 A:HIS58 3.5 67.7 1.0
CB A:CYS126 3.6 60.6 1.0
CA A:CYS126 3.9 73.1 1.0
N A:GLY127 4.0 56.8 1.0
ND1 A:HIS54 4.1 36.4 1.0
NE2 A:HIS132 4.3 44.6 1.0
ND1 A:HIS58 4.3 62.0 1.0
CG A:HIS54 4.4 32.8 1.0
C A:CYS126 4.5 68.7 1.0
CG A:HIS58 4.5 60.7 1.0
CE1 A:HIS132 4.6 49.9 1.0
N A:GLN128 4.9 51.9 1.0
O A:GLN125 4.9 74.0 1.0
O A:ALA120 5.0 72.2 1.0

Reference:

S.N.Ruzheinikov, S.K.Das, S.E.Sedelnikova, A.Hartley, S.J.Foster, M.J.Horsburgh, A.G.Cox, C.W.Mccleod, A.Mekhalfia, G.M.Blackburn, D.W.Rice, P.J.Baker. The 1.2 A Structure of A Novel Quorum-Sensing Protein, Bacillus Subtilis Luxs J.Mol.Biol. V. 313 111 2001.
ISSN: ISSN 0022-2836
PubMed: 11601850
DOI: 10.1006/JMBI.2001.5027
Page generated: Wed Dec 16 02:54:06 2020

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