Zinc in PDB 1hvo: Zinc-and Sequence-Dependent Binding to Nucleic Acids By the N-Terminal Zinc Finger Domain of the Hiv-1 Nucleocapsid Protein: uc(Nmr) Structure of the Complex with the Psi-Site Analog, D/Acgcc

The binding sites of Zinc atom in the Zinc-and Sequence-Dependent Binding to Nucleic Acids By the N-Terminal Zinc Finger Domain of the Hiv-1 Nucleocapsid Protein: uc(Nmr) Structure of the Complex with the Psi-Site Analog, D/Acgcc (pdb code 1hvo). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Zinc-and Sequence-Dependent Binding to Nucleic Acids By the N-Terminal Zinc Finger Domain of the Hiv-1 Nucleocapsid Protein: uc(Nmr) Structure of the Complex with the Psi-Site Analog, D/Acgcc, PDB code: 1hvo:

Zinc binding site 1 out of 1 in the Zinc-and Sequence-Dependent Binding to Nucleic Acids By the N-Terminal Zinc Finger Domain of the Hiv-1 Nucleocapsid Protein: uc(Nmr) Structure of the Complex with the Psi-Site Analog, D/Acgcc


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Zinc-and Sequence-Dependent Binding to Nucleic Acids By the N-Terminal Zinc Finger Domain of the Hiv-1 Nucleocapsid Protein: uc(Nmr) Structure of the Complex with the Psi-Site Analog, D/Acgcc within 5.0Å range: probe atom residue distance (Å) B Occ E:Zn19 b:0.0 occ:1.00 NE2 E:HIS11 2.0 0.0 1.0 SG E:CYS16 2.3 0.0 1.0 SG E:CYS6 2.3 0.0 1.0 SG E:CYS3 2.3 0.0 1.0 H E:CYS6 2.8 0.0 1.0 HB3 E:ASN5 2.9 0.0 1.0 CD2 E:HIS11 3.0 0.0 1.0 CE1 E:HIS11 3.0 0.0 1.0 HB2 E:CYS16 3.1 0.0 1.0 HD2 E:HIS11 3.2 0.0 1.0 HB3 E:CYS6 3.2 0.0 1.0 HB3 E:CYS3 3.2 0.0 1.0 HE1 E:HIS11 3.3 0.0 1.0 CB E:CYS3 3.3 0.0 1.0 CB E:CYS16 3.4 0.0 1.0 CB E:CYS6 3.4 0.0 1.0 N E:CYS6 3.6 0.0 1.0 HB2 E:CYS3 3.7 0.0 1.0 HD21 E:ASN5 3.8 0.0 1.0 HA E:CYS16 3.9 0.0 1.0 CB E:ASN5 4.0 0.0 1.0 HA E:ALA13 4.0 0.0 1.0 CA E:CYS6 4.1 0.0 1.0 CG E:HIS11 4.1 0.0 1.0 ND1 E:HIS11 4.1 0.0 1.0 H E:ASN5 4.1 0.0 1.0 HB3 E:CYS16 4.2 0.0 1.0 H E:GLY7 4.2 0.0 1.0 HB2 E:LYS8 4.2 0.0 1.0 H E:LYS8 4.2 0.0 1.0 HB2 E:CYS6 4.3 0.0 1.0 CA E:CYS16 4.3 0.0 1.0 H E:ALA18 4.4 0.0 1.0 C E:ASN5 4.4 0.0 1.0 HA E:ALA18 4.6 0.0 1.0 ND2 E:ASN5 4.6 0.0 1.0 CA E:ASN5 4.6 0.0 1.0 HB2 E:ASN5 4.6 0.0 1.0 CG E:ASN5 4.7 0.0 1.0 N E:ASN5 4.7 0.0 1.0 CA E:CYS3 4.7 0.0 1.0 N E:GLY7 4.9 0.0 1.0 HB3 E:ALA18 4.9 0.0 1.0 HA E:CYS6 4.9 0.0 1.0 O E:ILE12 4.9 0.0 1.0 H E:ARG17 5.0 0.0 1.0

T.L.South, M.F.Summers. Zinc- and Sequence-Dependent Binding to Nucleic Acids By the N-Terminal Zinc Finger of the Hiv-1 Nucleocapsid Protein: uc(Nmr) Structure of the Complex with the Psi-Site Analog, Dacgcc. Protein Sci. V. 2 3 1993.
ISSN: ISSN 0961-8368
PubMed: 8443588