Atomistry » Zinc » PDB 1h71-1hld » 1h7r
Atomistry »
  Zinc »
    PDB 1h71-1hld »
      1h7r »

Zinc in PDB 1h7r: Schiff-Base Complex of Yeast 5-Aminolaevulinic Acid Dehydratase with Succinylacetone at 2.0 A Resolution.

Enzymatic activity of Schiff-Base Complex of Yeast 5-Aminolaevulinic Acid Dehydratase with Succinylacetone at 2.0 A Resolution.

All present enzymatic activity of Schiff-Base Complex of Yeast 5-Aminolaevulinic Acid Dehydratase with Succinylacetone at 2.0 A Resolution.:
4.2.1.24;

Protein crystallography data

The structure of Schiff-Base Complex of Yeast 5-Aminolaevulinic Acid Dehydratase with Succinylacetone at 2.0 A Resolution., PDB code: 1h7r was solved by P.T.Erskine, R.Newbold, A.A.Brindley, S.P.Wood, P.M.Shoolingin-Jordan, M.J.Warren, J.B.Cooper, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 16.80 / 2.00
Space group I 4 2 2
Cell size a, b, c (Å), α, β, γ (°) 103.100, 103.100, 168.000, 90.00, 90.00, 90.00
R / Rfree (%) n/a / n/a

Zinc Binding Sites:

The binding sites of Zinc atom in the Schiff-Base Complex of Yeast 5-Aminolaevulinic Acid Dehydratase with Succinylacetone at 2.0 A Resolution. (pdb code 1h7r). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Schiff-Base Complex of Yeast 5-Aminolaevulinic Acid Dehydratase with Succinylacetone at 2.0 A Resolution., PDB code: 1h7r:

Zinc binding site 1 out of 1 in 1h7r

Go back to Zinc Binding Sites List in 1h7r
Zinc binding site 1 out of 1 in the Schiff-Base Complex of Yeast 5-Aminolaevulinic Acid Dehydratase with Succinylacetone at 2.0 A Resolution.


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Schiff-Base Complex of Yeast 5-Aminolaevulinic Acid Dehydratase with Succinylacetone at 2.0 A Resolution. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn1344

b:0.6
occ:1.00
 O A:HOH2282 2.0 0.6 1.0
SG A:CYS133 2.3 0.5 1.0
SG A:CYS143 2.3 0.6 1.0
SG A:CYS135 2.3 0.7 1.0
CB A:CYS143 2.7 1.0 1.0
CB A:CYS135 2.9 0.6 1.0
CB A:CYS133 3.1 0.4 1.0
CA A:CYS143 3.6 0.9 1.0
N A:CYS135 3.9 0.5 1.0
CA A:CYS135 4.0 0.6 1.0
N A:CYS143 4.3 0.7 1.0
OG A:SER179 4.4 0.4 1.0
CA A:CYS133 4.5 0.4 1.0
O A:SER179 4.6 0.5 1.0
CA A:ASP180 4.6 0.7 1.0
N A:LEU134 4.6 0.4 1.0
C A:CYS143 4.7 0.9 1.0
O A:HOH2206 4.8 0.7 1.0
C A:SER179 4.8 0.5 1.0
O A:CYS143 4.8 1.0 1.0
NZ A:LYS210 4.8 0.7 1.0
N A:ASP180 4.8 0.5 1.0
C A:CYS133 4.9 0.4 1.0

Reference:

P.T.Erskine, R.Newbold, A.A.Brindley, S.P.Wood, P.M.Shoolingin-Jordan, M.J.Warren, J.B.Cooper. The X-Ray Structure of Yeast 5-Aminolaevulinic Acid Dehydratase Complexed with Substrate and Three Inhibitors J.Mol.Biol. V. 312 133 2001.
ISSN: ISSN 0022-2836
PubMed: 11545591
DOI: 10.1006/JMBI.2001.4947
Page generated: Sun Oct 13 02:04:31 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy