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Zinc in PDB 1gat: Solution Structure of the Specific Dna Complex of the Zinc Containing Dna Binding Domain of the Erythroid Transcription Factor Gata-1 By Multidimensional uc(Nmr)

Zinc Binding Sites:

The binding sites of Zinc atom in the Solution Structure of the Specific Dna Complex of the Zinc Containing Dna Binding Domain of the Erythroid Transcription Factor Gata-1 By Multidimensional uc(Nmr) (pdb code 1gat). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Solution Structure of the Specific Dna Complex of the Zinc Containing Dna Binding Domain of the Erythroid Transcription Factor Gata-1 By Multidimensional uc(Nmr), PDB code: 1gat:

Zinc binding site 1 out of 1 in 1gat

Go back to Zinc Binding Sites List in 1gat
Zinc binding site 1 out of 1 in the Solution Structure of the Specific Dna Complex of the Zinc Containing Dna Binding Domain of the Erythroid Transcription Factor Gata-1 By Multidimensional uc(Nmr)


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Solution Structure of the Specific Dna Complex of the Zinc Containing Dna Binding Domain of the Erythroid Transcription Factor Gata-1 By Multidimensional uc(Nmr) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn67

b:0.3
occ:1.00
SG A:CYS10 2.3 0.4 1.0
SG A:CYS7 2.3 0.4 1.0
SG A:CYS31 2.3 0.5 1.0
SG A:CYS28 2.3 0.3 1.0
HB2 A:CYS31 3.1 0.4 1.0
HB3 A:CYS10 3.1 0.5 1.0
H A:CYS28 3.2 0.4 1.0
CB A:CYS10 3.3 0.5 1.0
CB A:CYS7 3.3 0.4 1.0
HG23 A:THR12 3.3 1.1 1.0
CB A:CYS31 3.3 0.4 1.0
H A:CYS10 3.3 0.4 1.0
HB3 A:CYS28 3.3 0.3 1.0
HB3 A:CYS7 3.3 0.5 1.0
CB A:CYS28 3.4 0.3 1.0
HG22 A:THR12 3.5 1.0 1.0
HB2 A:CYS7 3.5 0.5 1.0
HB2 A:ASN9 3.6 0.6 1.0
H A:CYS31 3.6 0.4 1.0
N A:CYS10 3.6 0.5 1.0
N A:CYS28 3.7 0.3 1.0
HH12 A:ARG47 3.8 4.9 1.0
NH1 A:ARG47 3.8 4.0 1.0
HH11 A:ARG47 3.8 3.6 1.0
CG2 A:THR12 3.9 0.4 1.0
CA A:CYS10 4.0 0.5 1.0
O A:CYS28 4.0 0.4 1.0
HB3 A:ASN9 4.0 0.6 1.0
HB3 A:CYS31 4.0 0.5 1.0
CA A:CYS28 4.1 0.3 1.0
HB2 A:CYS10 4.2 0.5 1.0
N A:CYS31 4.2 0.4 1.0
CB A:ASN9 4.2 0.6 1.0
H A:THR12 4.2 0.4 1.0
H A:ASN9 4.3 0.5 1.0
CA A:CYS31 4.3 0.4 1.0
HD3 A:ARG47 4.3 2.1 1.0
HB2 A:CYS28 4.3 0.3 1.0
C A:ASN9 4.3 0.6 1.0
CZ A:ARG47 4.3 3.7 1.0
HA A:VAL27 4.4 0.4 1.0
HB A:VAL27 4.4 0.4 1.0
C A:CYS28 4.5 0.4 1.0
HG21 A:THR12 4.5 1.1 1.0
HB2 A:ALA30 4.6 1.0 1.0
HA A:CYS31 4.6 0.4 1.0
C A:VAL27 4.6 0.4 1.0
CA A:CYS7 4.7 0.4 1.0
C A:CYS10 4.7 0.5 1.0
CA A:ASN9 4.7 0.6 1.0
HH22 A:ARG47 4.8 5.4 1.0
HB A:THR12 4.8 0.4 1.0
NH2 A:ARG47 4.8 4.6 1.0
HG13 A:VAL27 4.8 1.1 1.0
N A:ASN9 4.9 0.5 1.0
NE A:ARG47 4.9 2.7 1.0
CA A:VAL27 4.9 0.4 1.0
HA A:CYS10 4.9 0.6 1.0
CB A:THR12 5.0 0.4 1.0
HA A:CYS7 5.0 0.4 1.0

Reference:

J.G.Omichinski, G.M.Clore, O.Schaad, G.Felsenfeld, C.Trainor, E.Appella, S.J.Stahl, A.M.Gronenborn. uc(Nmr) Structure of A Specific Dna Complex of Zn-Containing Dna Binding Domain of Gata-1. Science V. 261 438 1993.
ISSN: ISSN 0036-8075
PubMed: 8332909
DOI: 10.1021/BI00131A004
Page generated: Sun Oct 13 01:28:20 2024

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