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Zinc in PDB 1fuk: Crystal Structure of the Carboxy Terminal Domain of Yeast EIF4A

Protein crystallography data

The structure of Crystal Structure of the Carboxy Terminal Domain of Yeast EIF4A, PDB code: 1fuk was solved by J.M.Caruthers, E.R.Johnson, D.B.Mckay, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.00 / 1.75
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 34.700, 52.100, 82.300, 90.00, 90.00, 90.00
R / Rfree (%) 22.1 / 25.2

Zinc Binding Sites:

The binding sites of Zinc atom in the Crystal Structure of the Carboxy Terminal Domain of Yeast EIF4A (pdb code 1fuk). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of the Carboxy Terminal Domain of Yeast EIF4A, PDB code: 1fuk:

Zinc binding site 1 out of 1 in 1fuk

Go back to Zinc Binding Sites List in 1fuk
Zinc binding site 1 out of 1 in the Crystal Structure of the Carboxy Terminal Domain of Yeast EIF4A


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of the Carboxy Terminal Domain of Yeast EIF4A within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn900

b:29.1
occ:1.00
NE2 A:HIS345 2.1 28.3 1.0
OE1 A:GLU341 2.1 36.4 1.0
CD A:GLU341 2.8 31.1 1.0
OE2 A:GLU341 2.9 34.3 1.0
CD2 A:HIS345 3.0 32.6 1.0
CE1 A:HIS345 3.1 30.1 1.0
CD1 A:ILE344 3.9 30.6 1.0
CG A:HIS345 4.1 30.9 1.0
ND1 A:HIS345 4.2 29.9 1.0
CG A:GLU341 4.3 35.8 1.0
O A:HOH739 4.4 48.6 1.0
O A:GLU341 4.5 30.0 1.0

Reference:

J.M.Caruthers, E.R.Johnson, D.B.Mckay. Crystal Structure of Yeast Initiation Factor 4A, A Dead-Box Rna Helicase. Proc.Natl.Acad.Sci.Usa V. 97 13080 2000.
ISSN: ISSN 0027-8424
PubMed: 11087862
DOI: 10.1073/PNAS.97.24.13080
Page generated: Fri Sep 25 21:37:20 2020
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