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Zinc in PDB 1fp0: Solution Structure of the Phd Domain From the Kap-1 Corepressor

Zinc Binding Sites:

The binding sites of Zinc atom in the Solution Structure of the Phd Domain From the Kap-1 Corepressor (pdb code 1fp0). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Solution Structure of the Phd Domain From the Kap-1 Corepressor, PDB code: 1fp0:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 1fp0

Go back to Zinc Binding Sites List in 1fp0
Zinc binding site 1 out of 2 in the Solution Structure of the Phd Domain From the Kap-1 Corepressor


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Solution Structure of the Phd Domain From the Kap-1 Corepressor within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn89

b:0.0
occ:1.00
SG A:CYS40 2.3 0.0 1.0
SG A:CYS43 2.3 0.0 1.0
SG A:CYS69 2.3 0.0 1.0
SG A:CYS66 2.3 0.0 1.0
HB3 A:GLN42 2.9 0.0 1.0
H A:SER67 3.1 0.0 1.0
HB2 A:CYS69 3.2 0.0 1.0
HB2 A:CYS43 3.2 0.0 1.0
HB2 A:CYS40 3.2 0.0 1.0
HB2 A:CYS66 3.3 0.0 1.0
CB A:CYS43 3.4 0.0 1.0
CB A:CYS69 3.4 0.0 1.0
H A:CYS43 3.4 0.0 1.0
CB A:CYS40 3.4 0.0 1.0
CB A:CYS66 3.4 0.0 1.0
HB2 A:PHE45 3.6 0.0 1.0
N A:CYS43 3.6 0.0 1.0
HB2 A:GLN42 3.6 0.0 1.0
CB A:GLN42 3.7 0.0 1.0
H A:GLN42 3.7 0.0 1.0
H A:GLU44 3.7 0.0 1.0
HA A:CYS66 3.7 0.0 1.0
H A:CYS69 3.8 0.0 1.0
HB3 A:CYS69 3.9 0.0 1.0
C A:GLN42 4.0 0.0 1.0
N A:SER67 4.0 0.0 1.0
CA A:CYS66 4.1 0.0 1.0
HB3 A:CYS40 4.1 0.0 1.0
CA A:CYS43 4.1 0.0 1.0
H A:PHE45 4.1 0.0 1.0
CA A:GLN42 4.2 0.0 1.0
O A:SER67 4.2 0.0 1.0
HB3 A:CYS43 4.3 0.0 1.0
N A:GLN42 4.3 0.0 1.0
HB3 A:CYS66 4.3 0.0 1.0
N A:CYS69 4.5 0.0 1.0
C A:CYS66 4.5 0.0 1.0
N A:GLU44 4.5 0.0 1.0
HD2 A:PHE45 4.6 0.0 1.0
CA A:CYS40 4.6 0.0 1.0
HG A:SER67 4.6 0.0 1.0
CB A:PHE45 4.6 0.0 1.0
O A:CYS40 4.6 0.0 1.0
O A:GLN42 4.6 0.0 1.0
CA A:CYS69 4.6 0.0 1.0
C A:CYS40 4.7 0.0 1.0
HB3 A:PHE45 4.8 0.0 1.0
C A:SER67 4.8 0.0 1.0
C A:CYS43 4.8 0.0 1.0
OE1 A:GLN42 4.9 0.0 1.0
HA A:CYS40 4.9 0.0 1.0
N A:PHE45 4.9 0.0 1.0
CG A:GLN42 5.0 0.0 1.0
HA A:CYS43 5.0 0.0 1.0

Zinc binding site 2 out of 2 in 1fp0

Go back to Zinc Binding Sites List in 1fp0
Zinc binding site 2 out of 2 in the Solution Structure of the Phd Domain From the Kap-1 Corepressor


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Solution Structure of the Phd Domain From the Kap-1 Corepressor within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn90

b:0.0
occ:1.00
HE1 A:HIS48 1.9 0.0 1.0
ND1 A:HIS48 2.0 0.0 1.0
CE1 A:HIS48 2.1 0.0 1.0
SG A:CYS51 2.3 0.0 1.0
SG A:CYS31 2.3 0.0 1.0
SG A:CYS28 2.3 0.0 1.0
HG13 A:VAL30 2.6 0.0 1.0
HA A:PHE47 2.8 0.0 1.0
HG11 A:VAL30 2.9 0.0 1.0
CG A:HIS48 3.2 0.0 1.0
CG1 A:VAL30 3.2 0.0 1.0
HB3 A:CYS51 3.2 0.0 1.0
NE2 A:HIS48 3.2 0.0 1.0
HB3 A:CYS31 3.3 0.0 1.0
CB A:CYS51 3.3 0.0 1.0
HB2 A:CYS28 3.4 0.0 1.0
H A:GLN32 3.4 0.0 1.0
CB A:CYS31 3.4 0.0 1.0
CB A:CYS28 3.4 0.0 1.0
H A:HIS48 3.5 0.0 1.0
HB2 A:CYS51 3.6 0.0 1.0
CA A:PHE47 3.6 0.0 1.0
N A:HIS48 3.7 0.0 1.0
C A:PHE47 3.7 0.0 1.0
HG12 A:VAL30 3.7 0.0 1.0
CD2 A:HIS48 3.7 0.0 1.0
H A:CYS31 3.8 0.0 1.0
HD23 A:LEU37 3.8 0.0 1.0
HB3 A:CYS28 3.8 0.0 1.0
HB2 A:HIS48 3.9 0.0 1.0
N A:CYS31 4.0 0.0 1.0
HD22 A:LEU37 4.0 0.0 1.0
CB A:HIS48 4.1 0.0 1.0
HB2 A:PHE47 4.1 0.0 1.0
N A:GLN32 4.2 0.0 1.0
HB2 A:GLN32 4.2 0.0 1.0
HB2 A:CYS31 4.2 0.0 1.0
CA A:CYS31 4.3 0.0 1.0
O A:PHE47 4.4 0.0 1.0
CD2 A:LEU37 4.4 0.0 1.0
CB A:PHE47 4.4 0.0 1.0
H A:VAL30 4.4 0.0 1.0
O A:CYS46 4.5 0.0 1.0
CB A:VAL30 4.5 0.0 1.0
CA A:HIS48 4.5 0.0 1.0
C A:VAL30 4.6 0.0 1.0
C A:CYS31 4.7 0.0 1.0
HB A:VAL30 4.7 0.0 1.0
CA A:CYS51 4.7 0.0 1.0
HB3 A:PHE47 4.7 0.0 1.0
CA A:CYS28 4.8 0.0 1.0
HD2 A:HIS48 4.8 0.0 1.0
N A:PHE47 4.8 0.0 1.0
HA A:LEU37 4.8 0.0 1.0
HA A:CYS28 4.9 0.0 1.0
O A:GLN32 4.9 0.0 1.0
H A:CYS51 5.0 0.0 1.0
O A:CYS51 5.0 0.0 1.0

Reference:

A.D.Capili, D.C.Schultz, F.J.Rauscheriii, K.L.Borden. Solution Structure of the Phd Domain From the Kap-1 Corepressor: Structural Determinants For Phd, Ring and Lim Zinc-Binding Domains. Embo J. V. 20 165 2001.
ISSN: ISSN 0261-4189
PubMed: 11226167
DOI: 10.1093/EMBOJ/20.1.165
Page generated: Fri Sep 25 21:35:39 2020
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