Atomistry » Zinc » PDB 1do5-1e08 » 1dwj
Atomistry »
  Zinc »
    PDB 1do5-1e08 »
      1dwj »

Zinc in PDB 1dwj: Study on Radiation Damage on A Cryocooled Crystal. Refined Part 6: Structure After A Radiation Dose of 54*10E15 Photons/MM2

Enzymatic activity of Study on Radiation Damage on A Cryocooled Crystal. Refined Part 6: Structure After A Radiation Dose of 54*10E15 Photons/MM2

All present enzymatic activity of Study on Radiation Damage on A Cryocooled Crystal. Refined Part 6: Structure After A Radiation Dose of 54*10E15 Photons/MM2:
3.2.1.147;

Protein crystallography data

The structure of Study on Radiation Damage on A Cryocooled Crystal. Refined Part 6: Structure After A Radiation Dose of 54*10E15 Photons/MM2, PDB code: 1dwj was solved by W.P.Burmeister, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 15.00 / 2.40
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 134.300, 136.400, 80.300, 90.00, 90.00, 90.00
R / Rfree (%) 18.6 / 24.5

Zinc Binding Sites:

The binding sites of Zinc atom in the Study on Radiation Damage on A Cryocooled Crystal. Refined Part 6: Structure After A Radiation Dose of 54*10E15 Photons/MM2 (pdb code 1dwj). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Study on Radiation Damage on A Cryocooled Crystal. Refined Part 6: Structure After A Radiation Dose of 54*10E15 Photons/MM2, PDB code: 1dwj:

Zinc binding site 1 out of 1 in 1dwj

Go back to Zinc Binding Sites List in 1dwj
Zinc binding site 1 out of 1 in the Study on Radiation Damage on A Cryocooled Crystal. Refined Part 6: Structure After A Radiation Dose of 54*10E15 Photons/MM2


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Study on Radiation Damage on A Cryocooled Crystal. Refined Part 6: Structure After A Radiation Dose of 54*10E15 Photons/MM2 within 5.0Å range:
probe atom residue distance (Å) B Occ
M:Zn1001

b:33.5
occ:1.00
 OD2 M:ASP70 2.0 43.8 1.0
NE2 M:HIS56 2.1 33.5 1.0
CG M:ASP70 2.7 37.4 1.0
OD1 M:ASP70 2.8 32.7 1.0
CE1 M:HIS56 3.0 35.1 1.0
CD2 M:HIS56 3.1 31.7 1.0
O M:HOH2114 3.5 46.9 1.0
O M:HOH2116 3.9 68.4 1.0
ND1 M:HIS56 4.1 34.4 1.0
CB M:ASP70 4.2 35.4 1.0
CG M:HIS56 4.2 33.6 1.0
ND2 M:ASN68 4.4 38.0 1.0
OD1 M:ASN68 4.6 36.1 1.0
CG M:ASN68 4.8 34.7 1.0

Reference:

W.P.Burmeister, W.P.Burmeister. N/A N/A.
ISSN: ISSN 0907-4449
PubMed: 10713520
DOI: 10.1107/S0907444999016261
Page generated: Sat Oct 12 23:54:40 2024

Last articles

Al in 8SGC
Al in 8SG9
Al in 8SFF
Al in 8SG8
Al in 8R1A
Al in 8Q75
Al in 8OIE
Al in 8OX6
Al in 8OX5
Al in 8OP8
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy