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Zinc in PDB 1dwg: Study on Radiation Damage on A Cryocooled Crystal: Part 3 Structure After Irradiation with 18.2*10E15 Photons/MM2.

Enzymatic activity of Study on Radiation Damage on A Cryocooled Crystal: Part 3 Structure After Irradiation with 18.2*10E15 Photons/MM2.

All present enzymatic activity of Study on Radiation Damage on A Cryocooled Crystal: Part 3 Structure After Irradiation with 18.2*10E15 Photons/MM2.:
3.2.1.147;

Protein crystallography data

The structure of Study on Radiation Damage on A Cryocooled Crystal: Part 3 Structure After Irradiation with 18.2*10E15 Photons/MM2., PDB code: 1dwg was solved by W.P.Burmeister, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 15.00 / 2.00
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 134.300, 136.400, 80.300, 90.00, 90.00, 90.00
R / Rfree (%) 18.4 / 19.3

Zinc Binding Sites:

The binding sites of Zinc atom in the Study on Radiation Damage on A Cryocooled Crystal: Part 3 Structure After Irradiation with 18.2*10E15 Photons/MM2. (pdb code 1dwg). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Study on Radiation Damage on A Cryocooled Crystal: Part 3 Structure After Irradiation with 18.2*10E15 Photons/MM2., PDB code: 1dwg:

Zinc binding site 1 out of 1 in 1dwg

Go back to Zinc Binding Sites List in 1dwg
Zinc binding site 1 out of 1 in the Study on Radiation Damage on A Cryocooled Crystal: Part 3 Structure After Irradiation with 18.2*10E15 Photons/MM2.


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Study on Radiation Damage on A Cryocooled Crystal: Part 3 Structure After Irradiation with 18.2*10E15 Photons/MM2. within 5.0Å range:
probe atom residue distance (Å) B Occ
M:Zn923

b:37.3
occ:1.00
 OD2 M:ASP70 2.0 23.5 1.0
NE2 M:HIS56 2.0 13.2 1.0
CG M:ASP70 2.8 17.1 1.0
OD1 M:ASP70 2.9 12.4 1.0
CE1 M:HIS56 3.0 14.8 1.0
CD2 M:HIS56 3.1 11.4 1.0
O M:HOH1014 3.6 26.6 1.0
ND1 M:HIS56 4.1 14.1 1.0
O M:HOH1540 4.1 48.1 1.0
CB M:ASP70 4.2 15.1 1.0
CG M:HIS56 4.2 13.3 1.0
ND2 M:ASN68 4.4 17.7 1.0
OD1 M:ASN68 4.8 15.8 1.0
CG M:ASN68 4.9 14.4 1.0

Reference:

W.P.Burmeister, W.P.Burmeister. N/A N/A.
ISSN: ISSN 0907-4449
PubMed: 10713520
DOI: 10.1107/S0907444999016261
Page generated: Wed Dec 16 02:47:29 2020

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