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Zinc in PDB 1dl6: Solution Structure of Human Tfiib N-Terminal Domain

Zinc Binding Sites:

The binding sites of Zinc atom in the Solution Structure of Human Tfiib N-Terminal Domain (pdb code 1dl6). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Solution Structure of Human Tfiib N-Terminal Domain, PDB code: 1dl6:

Zinc binding site 1 out of 1 in 1dl6

Go back to Zinc Binding Sites List in 1dl6
Zinc binding site 1 out of 1 in the Solution Structure of Human Tfiib N-Terminal Domain


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Solution Structure of Human Tfiib N-Terminal Domain within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn60

b:0.0
occ:1.00
ND1 A:HIS18 2.0 0.0 1.0
SG A:CYS34 2.3 0.0 1.0
SG A:CYS37 2.3 0.0 1.0
SG A:CYS15 2.3 0.0 1.0
H A:CYS37 2.6 0.0 1.0
HB2 A:HIS18 2.7 0.0 1.0
CE1 A:HIS18 3.0 0.0 1.0
CG A:HIS18 3.0 0.0 1.0
HB2 A:GLU36 3.1 0.0 1.0
HD21 A:LEU39 3.2 0.0 1.0
HB3 A:CYS34 3.3 0.0 1.0
HE1 A:HIS18 3.3 0.0 1.0
HB3 A:CYS37 3.3 0.0 1.0
CB A:CYS34 3.3 0.0 1.0
HB2 A:CYS15 3.3 0.0 1.0
CB A:CYS15 3.3 0.0 1.0
CB A:HIS18 3.4 0.0 1.0
CB A:CYS37 3.4 0.0 1.0
HB2 A:CYS34 3.5 0.0 1.0
N A:CYS37 3.5 0.0 1.0
HB3 A:CYS15 3.5 0.0 1.0
HD12 A:LEU23 3.9 0.0 1.0
HB3 A:HIS18 4.0 0.0 1.0
CA A:CYS37 4.0 0.0 1.0
H A:GLU36 4.1 0.0 1.0
CB A:GLU36 4.1 0.0 1.0
CD2 A:LEU39 4.2 0.0 1.0
NE2 A:HIS18 4.2 0.0 1.0
CD2 A:HIS18 4.2 0.0 1.0
HD22 A:LEU39 4.2 0.0 1.0
HB2 A:ASN17 4.2 0.0 1.0
HB2 A:CYS37 4.3 0.0 1.0
H A:GLY38 4.4 0.0 1.0
HB3 A:GLU36 4.4 0.0 1.0
N A:HIS18 4.4 0.0 1.0
CA A:HIS18 4.5 0.0 1.0
H A:ASN17 4.5 0.0 1.0
C A:GLU36 4.6 0.0 1.0
HD23 A:LEU39 4.6 0.0 1.0
H A:HIS18 4.6 0.0 1.0
C A:ASN17 4.7 0.0 1.0
CA A:GLU36 4.7 0.0 1.0
CA A:CYS34 4.7 0.0 1.0
CA A:CYS15 4.8 0.0 1.0
N A:GLU36 4.8 0.0 1.0
HB3 A:LEU39 4.8 0.0 1.0
HA A:CYS37 4.8 0.0 1.0
H A:LEU39 4.9 0.0 1.0
HD2 A:PRO35 4.9 0.0 1.0
C A:CYS37 4.9 0.0 1.0
CD1 A:LEU23 4.9 0.0 1.0
HD11 A:LEU23 4.9 0.0 1.0
N A:GLY38 4.9 0.0 1.0
HB1 A:ALA21 4.9 0.0 1.0
O A:ASN17 4.9 0.0 1.0
HG3 A:GLU36 5.0 0.0 1.0

Reference:

H.T.Chen, P.Legault, J.Glushka, J.G.Omichinski, R.A.Scott. Structure of A (CYS3HIS) Zinc Ribbon, A Ubiquitous Motif in Archaeal and Eucaryal Transcription. Protein Sci. V. 9 1743 2000.
ISSN: ISSN 0961-8368
PubMed: 11045620
Page generated: Mon Jan 25 16:08:44 2021

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