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Zinc in PDB 1dgz: Ribosmal Protein L36 From Thermus Thermophilus: uc(Nmr) Structure Ensemble

Zinc Binding Sites:

The binding sites of Zinc atom in the Ribosmal Protein L36 From Thermus Thermophilus: uc(Nmr) Structure Ensemble (pdb code 1dgz). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Ribosmal Protein L36 From Thermus Thermophilus: uc(Nmr) Structure Ensemble, PDB code: 1dgz:

Zinc binding site 1 out of 1 in 1dgz

Go back to Zinc Binding Sites List in 1dgz
Zinc binding site 1 out of 1 in the Ribosmal Protein L36 From Thermus Thermophilus: uc(Nmr) Structure Ensemble


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Ribosmal Protein L36 From Thermus Thermophilus: uc(Nmr) Structure Ensemble within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn38

b:0.0
occ:1.00
ND1 A:HIS32 2.0 0.0 1.0
SG A:CYS27 2.3 0.0 1.0
SG A:CYS11 2.3 0.0 1.0
SG A:CYS14 2.3 0.0 1.0
H A:CYS11 2.8 0.0 1.0
CG A:HIS32 3.0 0.0 1.0
CE1 A:HIS32 3.0 0.0 1.0
HB3 A:HIS32 3.2 0.0 1.0
HA A:CYS14 3.2 0.0 1.0
HB2 A:HIS32 3.2 0.0 1.0
HB3 A:CYS11 3.2 0.0 1.0
HE1 A:HIS32 3.3 0.0 1.0
HB2 A:CYS27 3.3 0.0 1.0
HB3 A:ASN29 3.3 0.0 1.0
CB A:CYS27 3.3 0.0 1.0
CB A:HIS32 3.3 0.0 1.0
CB A:CYS11 3.4 0.0 1.0
CB A:CYS14 3.4 0.0 1.0
HB3 A:CYS27 3.6 0.0 1.0
CA A:CYS14 3.6 0.0 1.0
HB A:ILE10 3.6 0.0 1.0
HB2 A:CYS14 3.6 0.0 1.0
N A:CYS14 3.7 0.0 1.0
N A:CYS11 3.7 0.0 1.0
H A:CYS14 3.7 0.0 1.0
HB2 A:ASN29 3.8 0.0 1.0
H A:ASN29 4.0 0.0 1.0
CB A:ASN29 4.1 0.0 1.0
CA A:CYS11 4.1 0.0 1.0
CD2 A:HIS32 4.1 0.0 1.0
NE2 A:HIS32 4.2 0.0 1.0
C A:LYS13 4.2 0.0 1.0
HB2 A:CYS11 4.3 0.0 1.0
H A:LYS13 4.3 0.0 1.0
H A:ILE10 4.3 0.0 1.0
HB3 A:CYS14 4.4 0.0 1.0
HB2 A:LYS13 4.4 0.0 1.0
C A:CYS11 4.6 0.0 1.0
CB A:ILE10 4.6 0.0 1.0
O A:LYS13 4.7 0.0 1.0
CA A:CYS27 4.7 0.0 1.0
C A:ILE10 4.8 0.0 1.0
HG23 A:ILE10 4.8 0.0 1.0
N A:LYS13 4.8 0.0 1.0
O A:CYS11 4.8 0.0 1.0
N A:ASN29 4.8 0.0 1.0
H A:GLU28 4.9 0.0 1.0
CA A:HIS32 4.9 0.0 1.0
N A:ILE10 4.9 0.0 1.0
HA A:CYS27 4.9 0.0 1.0
CA A:LYS13 5.0 0.0 1.0

Reference:

T.Hard, A.Rak, P.Allard, L.Kloo, M.Garber. The Solution Structure of Ribosomal Protein L36 From Thermus Thermophilus Reveals A Zinc-Ribbon-Like Fold. J.Mol.Biol. V. 296 169 2000.
ISSN: ISSN 0022-2836
PubMed: 10656825
DOI: 10.1006/JMBI.1999.3433
Page generated: Mon Jan 25 16:08:44 2021

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