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Zinc in PDB 1dfe: uc(Nmr) Structure of Ribosomal Protein L36 From Thermus Thermophilus

Zinc Binding Sites:

The binding sites of Zinc atom in the uc(Nmr) Structure of Ribosomal Protein L36 From Thermus Thermophilus (pdb code 1dfe). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the uc(Nmr) Structure of Ribosomal Protein L36 From Thermus Thermophilus, PDB code: 1dfe:

Zinc binding site 1 out of 1 in 1dfe

Go back to Zinc Binding Sites List in 1dfe
Zinc binding site 1 out of 1 in the uc(Nmr) Structure of Ribosomal Protein L36 From Thermus Thermophilus


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of uc(Nmr) Structure of Ribosomal Protein L36 From Thermus Thermophilus within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn38

b:0.4
occ:1.00
ND1 A:HIS32 2.0 0.3 1.0
SG A:CYS11 2.3 0.6 1.0
SG A:CYS14 2.3 0.7 1.0
SG A:CYS27 2.3 0.6 1.0
H A:CYS11 2.6 0.6 1.0
H A:CYS14 2.9 0.5 1.0
CE1 A:HIS32 3.0 0.4 1.0
CG A:HIS32 3.1 0.3 1.0
HE1 A:HIS32 3.2 0.5 1.0
HB2 A:LYS13 3.2 1.1 1.0
H A:LYS13 3.3 0.6 1.0
N A:CYS14 3.3 0.4 1.0
HB2 A:HIS32 3.3 0.3 1.0
HB3 A:ASN29 3.4 0.7 1.0
CB A:CYS11 3.4 0.5 1.0
HB2 A:CYS27 3.4 1.0 1.0
HB3 A:CYS11 3.4 0.5 1.0
CB A:CYS14 3.4 0.7 1.0
CB A:CYS27 3.4 0.5 1.0
HB3 A:HIS32 3.4 0.4 1.0
HB3 A:CYS14 3.4 1.3 1.0
N A:CYS11 3.5 0.4 1.0
HB A:ILE10 3.5 0.4 1.0
CB A:HIS32 3.5 0.3 1.0
HB2 A:ASN29 3.7 0.9 1.0
HB3 A:CYS27 3.8 1.0 1.0
CA A:CYS14 3.8 0.4 1.0
CA A:CYS11 3.9 0.5 1.0
C A:LYS13 3.9 0.5 1.0
CB A:LYS13 4.0 0.8 1.0
H A:ILE10 4.0 0.6 1.0
N A:LYS13 4.0 0.4 1.0
H A:ASN29 4.0 0.3 1.0
HA A:CYS14 4.0 0.5 1.0
CB A:ASN29 4.0 0.6 1.0
C A:CYS11 4.1 0.5 1.0
HB3 A:LYS13 4.1 1.1 1.0
NE2 A:HIS32 4.2 0.4 1.0
CD2 A:HIS32 4.2 0.3 1.0
CA A:LYS13 4.2 0.5 1.0
O A:CYS11 4.2 0.8 1.0
HB2 A:CYS11 4.3 0.6 1.0
HB2 A:CYS14 4.4 1.2 1.0
CB A:ILE10 4.5 0.4 1.0
HG23 A:ILE10 4.5 1.1 1.0
C A:ILE10 4.6 0.5 1.0
HD21 A:ASN29 4.6 0.8 1.0
CA A:CYS27 4.7 0.3 1.0
N A:ILE10 4.8 0.4 1.0
O A:LYS13 4.8 0.6 1.0
N A:ASP12 4.8 0.5 1.0
H A:GLU28 4.8 0.3 1.0
N A:ASN29 4.9 0.4 1.0
HA A:CYS27 4.9 0.4 1.0
CA A:ILE10 4.9 0.4 1.0
HA A:CYS11 4.9 0.5 1.0
HD3 A:LYS13 4.9 2.0 1.0
CG2 A:ILE10 5.0 0.5 1.0

Reference:

T.Hard, A.Rak, P.Allard, L.Kloo, M.Garber. The Solution Structure of Ribosomal Protein L36 From Thermus Thermophilus Reveals A Zinc-Ribbon-Like Fold. J.Mol.Biol. V. 296 169 2000.
ISSN: ISSN 0022-2836
PubMed: 10656825
DOI: 10.1006/JMBI.1999.3433
Page generated: Mon Jan 25 16:08:41 2021

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