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Zinc in PDB 1d4u: Interactions of Human Nucleotide Excision Repair Protein Xpa with RPA70 and Dna: Chemical Shift Mapping and 15N uc(Nmr) Relaxation Studies

Zinc Binding Sites:

The binding sites of Zinc atom in the Interactions of Human Nucleotide Excision Repair Protein Xpa with RPA70 and Dna: Chemical Shift Mapping and 15N uc(Nmr) Relaxation Studies (pdb code 1d4u). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Interactions of Human Nucleotide Excision Repair Protein Xpa with RPA70 and Dna: Chemical Shift Mapping and 15N uc(Nmr) Relaxation Studies, PDB code: 1d4u:

Zinc binding site 1 out of 1 in 1d4u

Go back to Zinc Binding Sites List in 1d4u
Zinc binding site 1 out of 1 in the Interactions of Human Nucleotide Excision Repair Protein Xpa with RPA70 and Dna: Chemical Shift Mapping and 15N uc(Nmr) Relaxation Studies


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Interactions of Human Nucleotide Excision Repair Protein Xpa with RPA70 and Dna: Chemical Shift Mapping and 15N uc(Nmr) Relaxation Studies within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn112

b:0.0
occ:1.00
SG A:CYS8 2.3 0.0 1.0
SG A:CYS29 2.3 0.0 1.0
SG A:CYS11 2.4 0.0 1.0
SG A:CYS32 2.4 0.0 1.0
HB3 A:CYS8 2.9 0.0 1.0
CB A:CYS8 3.0 0.0 1.0
HB2 A:GLU10 3.0 0.0 1.0
HB2 A:CYS8 3.1 0.0 1.0
H A:CYS11 3.1 0.0 1.0
HG23 A:THR28 3.4 0.0 1.0
H A:CYS29 3.4 0.0 1.0
HA A:THR28 3.5 0.0 1.0
HB2 A:LYS13 3.6 0.0 1.0
H A:CYS32 3.7 0.0 1.0
HB3 A:ASP31 3.7 0.0 1.0
N A:CYS29 3.8 0.0 1.0
HB3 A:LYS13 3.9 0.0 1.0
N A:CYS11 3.9 0.0 1.0
CB A:CYS29 4.0 0.0 1.0
H A:GLY12 4.0 0.0 1.0
CB A:CYS11 4.1 0.0 1.0
CB A:GLU10 4.1 0.0 1.0
CB A:CYS32 4.2 0.0 1.0
CB A:LYS13 4.3 0.0 1.0
C A:THR28 4.3 0.0 1.0
HG3 A:GLU10 4.3 0.0 1.0
CA A:THR28 4.3 0.0 1.0
CG2 A:THR28 4.4 0.0 1.0
HB3 A:CYS29 4.4 0.0 1.0
N A:CYS32 4.4 0.0 1.0
HD3 A:LYS13 4.4 0.0 1.0
H A:GLU10 4.4 0.0 1.0
CA A:CYS8 4.4 0.0 1.0
CA A:CYS29 4.5 0.0 1.0
HB3 A:CYS11 4.5 0.0 1.0
HB2 A:CYS32 4.6 0.0 1.0
CA A:CYS11 4.6 0.0 1.0
HG21 A:THR28 4.6 0.0 1.0
HB3 A:GLU10 4.6 0.0 1.0
N A:GLY12 4.7 0.0 1.0
H A:ASP31 4.7 0.0 1.0
HB2 A:CYS29 4.7 0.0 1.0
CG A:GLU10 4.7 0.0 1.0
HB2 A:CYS11 4.7 0.0 1.0
HB3 A:CYS32 4.8 0.0 1.0
CB A:ASP31 4.8 0.0 1.0
C A:GLU10 4.8 0.0 1.0
CA A:CYS32 4.9 0.0 1.0
HA A:CYS8 4.9 0.0 1.0
H A:LYS13 4.9 0.0 1.0
CA A:GLU10 4.9 0.0 1.0
C A:CYS8 4.9 0.0 1.0
N A:GLU10 4.9 0.0 1.0
N A:LYS13 5.0 0.0 1.0

Reference:

G.W.Buchko, G.W.Daughdrill, R.De Lorimier, K.Rao B, N.G.Isern, J.M.Lingbeck, J.S.Taylor, M.S.Wold, M.Gochin, L.D.Spicer, D.F.Lowry, M.A.Kennedy. Interactions of Human Nucleotide Excision Repair Protein Xpa with Dna and RPA70 Delta C327: Chemical Shift Mapping and 15N uc(Nmr) Relaxation Studies. Biochemistry V. 38 15116 1999.
ISSN: ISSN 0006-2960
PubMed: 10563794
DOI: 10.1021/BI991755P
Page generated: Sat Oct 12 23:28:09 2024

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