Zinc in PDB 1ctl: Structure of the Carboxy-Terminal Lim Domain From the Cysteine Rich Protein Crp
Zinc Binding Sites:
The binding sites of Zinc atom in the Structure of the Carboxy-Terminal Lim Domain From the Cysteine Rich Protein Crp
(pdb code 1ctl). This binding sites where shown within
5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the
Structure of the Carboxy-Terminal Lim Domain From the Cysteine Rich Protein Crp, PDB code: 1ctl:
Jump to Zinc binding site number:
1;
2;
Zinc binding site 1 out
of 2 in 1ctl
Go back to
Zinc Binding Sites List in 1ctl
Zinc binding site 1 out
of 2 in the Structure of the Carboxy-Terminal Lim Domain From the Cysteine Rich Protein Crp
Mono view
Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 1 of Structure of the Carboxy-Terminal Lim Domain From the Cysteine Rich Protein Crp within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Zn86
b:0.0
occ:1.00
|
ND1
|
A:HIS32
|
2.0
|
0.0
|
1.0
|
SG
|
A:CYS14
|
2.3
|
0.0
|
1.0
|
SG
|
A:CYS35
|
2.3
|
0.0
|
1.0
|
SG
|
A:CYS11
|
2.3
|
0.0
|
1.0
|
HB2
|
A:HIS32
|
2.7
|
0.0
|
1.0
|
CG
|
A:HIS32
|
3.0
|
0.0
|
1.0
|
CE1
|
A:HIS32
|
3.0
|
0.0
|
1.0
|
H
|
A:CYS14
|
3.0
|
0.0
|
1.0
|
HB3
|
A:CYS14
|
3.2
|
0.0
|
1.0
|
HB2
|
A:CYS35
|
3.3
|
0.0
|
1.0
|
HE1
|
A:HIS32
|
3.3
|
0.0
|
1.0
|
HB3
|
A:CYS11
|
3.3
|
0.0
|
1.0
|
CB
|
A:HIS32
|
3.3
|
0.0
|
1.0
|
CB
|
A:CYS35
|
3.4
|
0.0
|
1.0
|
CB
|
A:CYS11
|
3.4
|
0.0
|
1.0
|
CB
|
A:CYS14
|
3.4
|
0.0
|
1.0
|
H
|
A:HIS32
|
3.5
|
0.0
|
1.0
|
HB3
|
A:ARG13
|
3.6
|
0.0
|
1.0
|
HB2
|
A:CYS11
|
3.6
|
0.0
|
1.0
|
HB3
|
A:CYS35
|
3.7
|
0.0
|
1.0
|
N
|
A:CYS14
|
3.8
|
0.0
|
1.0
|
HB2
|
A:ARG13
|
3.9
|
0.0
|
1.0
|
N
|
A:HIS32
|
4.1
|
0.0
|
1.0
|
NE2
|
A:HIS32
|
4.1
|
0.0
|
1.0
|
CD2
|
A:HIS32
|
4.1
|
0.0
|
1.0
|
HB3
|
A:HIS32
|
4.1
|
0.0
|
1.0
|
CA
|
A:CYS14
|
4.2
|
0.0
|
1.0
|
CB
|
A:ARG13
|
4.2
|
0.0
|
1.0
|
HB2
|
A:CYS14
|
4.2
|
0.0
|
1.0
|
CA
|
A:HIS32
|
4.3
|
0.0
|
1.0
|
H
|
A:GLN16
|
4.6
|
0.0
|
1.0
|
H
|
A:ARG13
|
4.6
|
0.0
|
1.0
|
H
|
A:GLY15
|
4.6
|
0.0
|
1.0
|
HB2
|
A:GLN16
|
4.7
|
0.0
|
1.0
|
CA
|
A:CYS35
|
4.7
|
0.0
|
1.0
|
CA
|
A:CYS11
|
4.8
|
0.0
|
1.0
|
C
|
A:ARG13
|
4.8
|
0.0
|
1.0
|
HA
|
A:HIS32
|
4.9
|
0.0
|
1.0
|
HA
|
A:TRP31
|
4.9
|
0.0
|
1.0
|
HA
|
A:CYS14
|
5.0
|
0.0
|
1.0
|
CA
|
A:ARG13
|
5.0
|
0.0
|
1.0
|
HA
|
A:CYS35
|
5.0
|
0.0
|
1.0
|
|
Zinc binding site 2 out
of 2 in 1ctl
Go back to
Zinc Binding Sites List in 1ctl
Zinc binding site 2 out
of 2 in the Structure of the Carboxy-Terminal Lim Domain From the Cysteine Rich Protein Crp
Mono view
Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 2 of Structure of the Carboxy-Terminal Lim Domain From the Cysteine Rich Protein Crp within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Zn87
b:0.0
occ:1.00
|
SG
|
A:CYS59
|
2.3
|
0.0
|
1.0
|
SG
|
A:CYS38
|
2.3
|
0.0
|
1.0
|
SG
|
A:CYS41
|
2.3
|
0.0
|
1.0
|
SG
|
A:CYS62
|
2.3
|
0.0
|
1.0
|
H
|
A:CYS59
|
2.9
|
0.0
|
1.0
|
H
|
A:CYS41
|
3.0
|
0.0
|
1.0
|
HB2
|
A:CYS62
|
3.1
|
0.0
|
1.0
|
HB3
|
A:CYS41
|
3.3
|
0.0
|
1.0
|
CB
|
A:CYS38
|
3.3
|
0.0
|
1.0
|
CB
|
A:CYS62
|
3.4
|
0.0
|
1.0
|
CB
|
A:CYS41
|
3.4
|
0.0
|
1.0
|
HB3
|
A:CYS38
|
3.4
|
0.0
|
1.0
|
HB3
|
A:LYS40
|
3.4
|
0.0
|
1.0
|
CB
|
A:CYS59
|
3.4
|
0.0
|
1.0
|
HB3
|
A:CYS59
|
3.4
|
0.0
|
1.0
|
HB2
|
A:CYS38
|
3.5
|
0.0
|
1.0
|
N
|
A:CYS41
|
3.6
|
0.0
|
1.0
|
N
|
A:CYS59
|
3.8
|
0.0
|
1.0
|
CA
|
A:CYS41
|
4.0
|
0.0
|
1.0
|
CA
|
A:CYS59
|
4.1
|
0.0
|
1.0
|
HB2
|
A:TYR58
|
4.1
|
0.0
|
1.0
|
HB3
|
A:CYS62
|
4.2
|
0.0
|
1.0
|
HB2
|
A:CYS41
|
4.3
|
0.0
|
1.0
|
CA
|
A:CYS62
|
4.3
|
0.0
|
1.0
|
H
|
A:GLY42
|
4.3
|
0.0
|
1.0
|
HB2
|
A:CYS59
|
4.3
|
0.0
|
1.0
|
HA
|
A:CYS62
|
4.4
|
0.0
|
1.0
|
H
|
A:LYS40
|
4.4
|
0.0
|
1.0
|
CB
|
A:LYS40
|
4.4
|
0.0
|
1.0
|
H
|
A:CYS62
|
4.4
|
0.0
|
1.0
|
N
|
A:CYS62
|
4.5
|
0.0
|
1.0
|
HD22
|
A:LEU45
|
4.5
|
0.0
|
1.0
|
HA
|
A:TYR58
|
4.6
|
0.0
|
1.0
|
C
|
A:LYS40
|
4.6
|
0.0
|
1.0
|
HB2
|
A:LYS40
|
4.6
|
0.0
|
1.0
|
H
|
A:LYS43
|
4.6
|
0.0
|
1.0
|
C
|
A:GLY61
|
4.7
|
0.0
|
1.0
|
C
|
A:CYS59
|
4.7
|
0.0
|
1.0
|
HA3
|
A:GLY61
|
4.8
|
0.0
|
1.0
|
CA
|
A:CYS38
|
4.8
|
0.0
|
1.0
|
HZ1
|
A:LYS43
|
4.8
|
0.0
|
1.0
|
O
|
A:CYS59
|
4.8
|
0.0
|
1.0
|
C
|
A:TYR58
|
4.9
|
0.0
|
1.0
|
HZ3
|
A:LYS40
|
4.9
|
0.0
|
1.0
|
HG
|
A:LEU45
|
4.9
|
0.0
|
1.0
|
HA
|
A:CYS41
|
4.9
|
0.0
|
1.0
|
CB
|
A:TYR58
|
4.9
|
0.0
|
1.0
|
CA
|
A:LYS40
|
4.9
|
0.0
|
1.0
|
C
|
A:CYS41
|
5.0
|
0.0
|
1.0
|
|
Reference:
G.C.Perez-Alvarado,
C.Miles,
J.W.Michelsen,
H.A.Louis,
D.R.Winge,
M.C.Beckerle,
M.F.Summers.
Structure of the Carboxy-Terminal Lim Domain From the Cysteine Rich Protein Crp. Nat.Struct.Biol. V. 1 388 1994.
ISSN: ISSN 1072-8368
PubMed: 7664053
DOI: 10.1038/NSB0694-388
Page generated: Sat Oct 12 23:16:41 2024
|