Atomistry » Zinc » PDB 1bvt-1cao » 1bzo
Atomistry »
  Zinc »
    PDB 1bvt-1cao »
      1bzo »

Zinc in PDB 1bzo: Three-Dimensional Structure of Prokaryotic Cu,Zn Superoxide Dismutase From P.Leiognathi, Solved By X-Ray Crystallography.

Enzymatic activity of Three-Dimensional Structure of Prokaryotic Cu,Zn Superoxide Dismutase From P.Leiognathi, Solved By X-Ray Crystallography.

All present enzymatic activity of Three-Dimensional Structure of Prokaryotic Cu,Zn Superoxide Dismutase From P.Leiognathi, Solved By X-Ray Crystallography.:
1.15.1.1;

Protein crystallography data

The structure of Three-Dimensional Structure of Prokaryotic Cu,Zn Superoxide Dismutase From P.Leiognathi, Solved By X-Ray Crystallography., PDB code: 1bzo was solved by D.Bordo, D.Matak, K.Djinovic-Carugo, C.Rosano, A.Pesce, M.Bolognesi, M.E.Stroppolo, M.Falconi, A.Battistoni, A.Desideri, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 24.70 / 2.10
Space group H 3 2
Cell size a, b, c (Å), α, β, γ (°) 86.890, 86.890, 99.010, 90.00, 90.00, 120.00
R / Rfree (%) 19 / 26

Other elements in 1bzo:

The structure of Three-Dimensional Structure of Prokaryotic Cu,Zn Superoxide Dismutase From P.Leiognathi, Solved By X-Ray Crystallography. also contains other interesting chemical elements:

Copper (Cu) 1 atom
Uranium (U) 2 atoms

Zinc Binding Sites:

The binding sites of Zinc atom in the Three-Dimensional Structure of Prokaryotic Cu,Zn Superoxide Dismutase From P.Leiognathi, Solved By X-Ray Crystallography. (pdb code 1bzo). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Three-Dimensional Structure of Prokaryotic Cu,Zn Superoxide Dismutase From P.Leiognathi, Solved By X-Ray Crystallography., PDB code: 1bzo:

Zinc binding site 1 out of 1 in 1bzo

Go back to Zinc Binding Sites List in 1bzo
Zinc binding site 1 out of 1 in the Three-Dimensional Structure of Prokaryotic Cu,Zn Superoxide Dismutase From P.Leiognathi, Solved By X-Ray Crystallography.


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Three-Dimensional Structure of Prokaryotic Cu,Zn Superoxide Dismutase From P.Leiognathi, Solved By X-Ray Crystallography. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn151

b:19.9
occ:1.00
 ND1 A:HIS69 1.9 8.7 1.0
ND1 A:HIS61 2.0 25.4 1.0
ND1 A:HIS78 2.0 18.5 1.0
OD1 A:ASP81 2.1 20.1 1.0
CE1 A:HIS69 2.7 11.1 1.0
CG A:ASP81 2.8 15.6 1.0
CE1 A:HIS61 2.9 24.0 1.0
CE1 A:HIS78 2.9 16.5 1.0
OD2 A:ASP81 3.0 10.1 1.0
CG A:HIS61 3.1 24.6 1.0
CG A:HIS78 3.1 9.5 1.0
CG A:HIS69 3.1 11.0 1.0
CB A:HIS78 3.5 8.6 1.0
CB A:HIS61 3.5 22.5 1.0
CB A:HIS69 3.6 15.2 1.0
CA A:HIS69 3.8 22.3 1.0
NE2 A:HIS69 4.0 13.0 1.0
NE2 A:HIS78 4.1 17.2 1.0
NE2 A:HIS61 4.1 27.0 1.0
CD2 A:HIS69 4.1 15.0 1.0
CD2 A:HIS78 4.2 17.4 1.0
CD2 A:HIS61 4.2 24.5 1.0
CB A:ASP81 4.2 13.0 1.0
CD2 A:LEU135 4.3 25.8 1.0
N A:GLY70 4.5 16.1 1.0
O A:LYS68A 4.5 21.7 1.0
CA A:ASP81 4.7 16.0 1.0
C A:HIS69 4.7 18.8 1.0
CA A:HIS78 4.7 9.7 1.0
N A:HIS78 4.8 11.3 1.0
N A:HIS69 4.9 23.3 1.0
N A:ASP81 4.9 14.7 1.0
CD2 A:HIS44 5.0 19.3 1.0

Reference:

D.Bordo, D.Matak, K.Djinovic-Carugo, C.Rosano, A.Pesce, M.Bolognesi, M.E.Stroppolo, M.Falconi, A.Battistoni, A.Desideri. Evolutionary Constraints For Dimer Formation in Prokaryotic Cu,Zn Superoxide Dismutase. J.Mol.Biol. V. 285 283 1999.
ISSN: ISSN 0022-2836
PubMed: 9878406
DOI: 10.1006/JMBI.1998.2267
Page generated: Wed Dec 16 02:46:13 2020

Last articles

Mg in 4Y52
Mg in 4Y30
Mg in 4Y2V
Mg in 4Y2X
Mg in 4Y2Y
Mg in 4Y2U
Mg in 4Y2T
Mg in 4Y2Q
Mg in 4Y2R
Mg in 4Y2S
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy