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Zinc in PDB 1bbo: High-Resolution Solution Structure of the Double CYS2*HIS2 Zinc Finger From the Human Enhancer Binding Protein Mbp-1

Zinc Binding Sites:

The binding sites of Zinc atom in the High-Resolution Solution Structure of the Double CYS2*HIS2 Zinc Finger From the Human Enhancer Binding Protein Mbp-1 (pdb code 1bbo). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the High-Resolution Solution Structure of the Double CYS2*HIS2 Zinc Finger From the Human Enhancer Binding Protein Mbp-1, PDB code: 1bbo:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 1bbo

Go back to Zinc Binding Sites List in 1bbo
Zinc binding site 1 out of 2 in the High-Resolution Solution Structure of the Double CYS2*HIS2 Zinc Finger From the Human Enhancer Binding Protein Mbp-1


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of High-Resolution Solution Structure of the Double CYS2*HIS2 Zinc Finger From the Human Enhancer Binding Protein Mbp-1 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn60

b:0.0
occ:1.00
NE2 A:HIS24 2.0 0.0 1.0
NE2 A:HIS20 2.0 0.0 1.0
SG A:CYS4 2.3 0.0 1.0
SG A:CYS7 2.3 0.0 1.0
H A:CYS7 2.8 0.0 1.0
CE1 A:HIS24 3.0 0.0 1.0
CD2 A:HIS24 3.0 0.0 1.0
CE1 A:HIS20 3.0 0.0 1.0
CD2 A:HIS20 3.0 0.0 1.0
HB3 A:GLU6 3.1 0.0 1.0
HB2 A:CYS7 3.2 0.0 1.0
HE1 A:HIS24 3.2 0.0 1.0
HE1 A:HIS20 3.2 0.0 1.0
HD2 A:HIS24 3.2 0.0 1.0
HD2 A:HIS20 3.3 0.0 1.0
HB2 A:CYS4 3.3 0.0 1.0
CB A:CYS7 3.3 0.0 1.0
CB A:CYS4 3.3 0.0 1.0
HB3 A:CYS4 3.5 0.0 1.0
N A:CYS7 3.6 0.0 1.0
ND1 A:HIS24 4.1 0.0 1.0
ND1 A:HIS20 4.1 0.0 1.0
CA A:CYS7 4.1 0.0 1.0
CG A:HIS24 4.1 0.0 1.0
CG A:HIS20 4.1 0.0 1.0
HB3 A:CYS7 4.2 0.0 1.0
H A:GLY8 4.2 0.0 1.0
CB A:GLU6 4.2 0.0 1.0
HB A:ILE9 4.3 0.0 1.0
H A:GLU6 4.4 0.0 1.0
H A:ILE9 4.5 0.0 1.0
HB2 A:GLU6 4.5 0.0 1.0
HG22 A:ILE9 4.6 0.0 1.0
HA A:ILE21 4.7 0.0 1.0
C A:GLU6 4.7 0.0 1.0
CA A:CYS4 4.8 0.0 1.0
HA A:CYS7 4.9 0.0 1.0
CA A:GLU6 4.9 0.0 1.0
HG2 A:GLU6 4.9 0.0 1.0
N A:GLY8 4.9 0.0 1.0
HD1 A:HIS24 4.9 0.0 1.0
HD1 A:HIS20 5.0 0.0 1.0
HG21 A:ILE9 5.0 0.0 1.0
N A:GLU6 5.0 0.0 1.0

Zinc binding site 2 out of 2 in 1bbo

Go back to Zinc Binding Sites List in 1bbo
Zinc binding site 2 out of 2 in the High-Resolution Solution Structure of the Double CYS2*HIS2 Zinc Finger From the Human Enhancer Binding Protein Mbp-1


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of High-Resolution Solution Structure of the Double CYS2*HIS2 Zinc Finger From the Human Enhancer Binding Protein Mbp-1 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn61

b:0.0
occ:1.00
NE2 A:HIS54 2.0 0.0 1.0
NE2 A:HIS48 2.0 0.0 1.0
SG A:CYS35 2.3 0.0 1.0
SG A:CYS32 2.3 0.0 1.0
H A:CYS35 2.7 0.0 1.0
CE1 A:HIS54 3.0 0.0 1.0
CE1 A:HIS48 3.0 0.0 1.0
CD2 A:HIS48 3.0 0.0 1.0
CD2 A:HIS54 3.0 0.0 1.0
HB2 A:TYR34 3.0 0.0 1.0
HE1 A:HIS54 3.2 0.0 1.0
HB2 A:CYS35 3.2 0.0 1.0
HE1 A:HIS48 3.2 0.0 1.0
HD2 A:HIS48 3.3 0.0 1.0
HD2 A:HIS54 3.3 0.0 1.0
HB2 A:CYS32 3.3 0.0 1.0
CB A:CYS35 3.3 0.0 1.0
CB A:CYS32 3.4 0.0 1.0
N A:CYS35 3.6 0.0 1.0
HB3 A:CYS32 3.6 0.0 1.0
ND1 A:HIS54 4.1 0.0 1.0
ND1 A:HIS48 4.1 0.0 1.0
CB A:TYR34 4.1 0.0 1.0
CA A:CYS35 4.1 0.0 1.0
HD1 A:TYR34 4.1 0.0 1.0
CG A:HIS48 4.2 0.0 1.0
CG A:HIS54 4.2 0.0 1.0
H A:TYR34 4.2 0.0 1.0
HB3 A:CYS35 4.2 0.0 1.0
HB3 A:TYR34 4.6 0.0 1.0
HE3 A:MET49 4.6 0.0 1.0
C A:TYR34 4.6 0.0 1.0
HB3 A:ALA53 4.7 0.0 1.0
HA A:CYS35 4.8 0.0 1.0
N A:TYR34 4.8 0.0 1.0
CA A:TYR34 4.8 0.0 1.0
CD1 A:TYR34 4.8 0.0 1.0
CA A:CYS32 4.8 0.0 1.0
CG A:TYR34 4.9 0.0 1.0
HD1 A:HIS54 4.9 0.0 1.0
HD1 A:HIS48 5.0 0.0 1.0

Reference:

J.G.Omichinski, G.M.Clore, M.Robien, K.Sakaguchi, E.Appella, A.M.Gronenborn. High-Resolution Solution Structure of the Double CYS2HIS2 Zinc Finger From the Human Enhancer Binding Protein Mbp-1. Biochemistry V. 31 3907 1992.
ISSN: ISSN 0006-2960
PubMed: 1567844
DOI: 10.1021/BI00131A004
Page generated: Sat Oct 12 22:29:24 2024

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