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Zinc in PDB 1a7i: Amino-Terminal Lim Domain From Quail Cysteine and Glycine- Rich Protein, uc(Nmr), Minimized Average Structure

Zinc Binding Sites:

The binding sites of Zinc atom in the Amino-Terminal Lim Domain From Quail Cysteine and Glycine- Rich Protein, uc(Nmr), Minimized Average Structure (pdb code 1a7i). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Amino-Terminal Lim Domain From Quail Cysteine and Glycine- Rich Protein, uc(Nmr), Minimized Average Structure, PDB code: 1a7i:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 1a7i

Go back to Zinc Binding Sites List in 1a7i
Zinc binding site 1 out of 2 in the Amino-Terminal Lim Domain From Quail Cysteine and Glycine- Rich Protein, uc(Nmr), Minimized Average Structure


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Amino-Terminal Lim Domain From Quail Cysteine and Glycine- Rich Protein, uc(Nmr), Minimized Average Structure within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn82

b:0.0
occ:1.00
ND1 A:HIS31 2.1 0.0 1.0
SG A:CYS10 2.2 0.0 1.0
SG A:CYS13 2.3 0.0 1.0
SG A:CYS34 2.3 0.0 1.0
H A:CYS13 2.7 0.0 1.0
CE1 A:HIS31 3.0 0.0 1.0
HB3 A:CYS34 3.0 0.0 1.0
HB3 A:CYS10 3.1 0.0 1.0
CG A:HIS31 3.1 0.0 1.0
HE1 A:HIS31 3.1 0.0 1.0
HB2 A:HIS31 3.2 0.0 1.0
CB A:CYS10 3.2 0.0 1.0
HB1 A:ALA12 3.3 0.0 1.0
CB A:CYS34 3.3 0.0 1.0
H A:HIS31 3.4 0.0 1.0
HB2 A:CYS10 3.4 0.0 1.0
CB A:CYS13 3.5 0.0 1.0
H A:GLY14 3.5 0.0 1.0
N A:CYS13 3.6 0.0 1.0
CB A:HIS31 3.6 0.0 1.0
O A:CYS34 3.7 0.0 1.0
CA A:CYS13 4.0 0.0 1.0
HB2 A:CYS34 4.1 0.0 1.0
HB2 A:ARG15 4.1 0.0 1.0
HB2 A:CYS13 4.1 0.0 1.0
H A:ARG15 4.1 0.0 1.0
NE2 A:HIS31 4.1 0.0 1.0
H A:ALA12 4.1 0.0 1.0
CD2 A:HIS31 4.2 0.0 1.0
N A:HIS31 4.2 0.0 1.0
HB3 A:CYS13 4.3 0.0 1.0
CB A:ALA12 4.3 0.0 1.0
N A:GLY14 4.4 0.0 1.0
CA A:HIS31 4.5 0.0 1.0
CA A:CYS34 4.5 0.0 1.0
C A:CYS34 4.5 0.0 1.0
HB3 A:HIS31 4.5 0.0 1.0
HB2 A:ALA12 4.5 0.0 1.0
C A:ALA12 4.7 0.0 1.0
CA A:CYS10 4.7 0.0 1.0
HB3 A:PHE30 4.8 0.0 1.0
C A:CYS13 4.8 0.0 1.0
CA A:ALA12 4.8 0.0 1.0
HD13 A:LEU36 4.8 0.0 1.0
N A:ALA12 4.8 0.0 1.0
H A:CYS34 4.9 0.0 1.0
HA A:CYS13 4.9 0.0 1.0
HD11 A:LEU36 4.9 0.0 1.0
N A:ARG15 5.0 0.0 1.0

Zinc binding site 2 out of 2 in 1a7i

Go back to Zinc Binding Sites List in 1a7i
Zinc binding site 2 out of 2 in the Amino-Terminal Lim Domain From Quail Cysteine and Glycine- Rich Protein, uc(Nmr), Minimized Average Structure


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Amino-Terminal Lim Domain From Quail Cysteine and Glycine- Rich Protein, uc(Nmr), Minimized Average Structure within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn83

b:0.0
occ:1.00
SG A:CYS40 2.2 0.0 1.0
SG A:CYS58 2.2 0.0 1.0
SG A:CYS61 2.3 0.0 1.0
SG A:CYS37 2.4 0.0 1.0
HB2 A:CYS61 3.0 0.0 1.0
HB3 A:CYS40 3.0 0.0 1.0
HB3 A:CYS58 3.1 0.0 1.0
H A:CYS58 3.1 0.0 1.0
H A:CYS61 3.1 0.0 1.0
HB2 A:CYS37 3.2 0.0 1.0
H A:CYS40 3.2 0.0 1.0
CB A:CYS40 3.3 0.0 1.0
CB A:CYS61 3.3 0.0 1.0
CB A:CYS58 3.4 0.0 1.0
CB A:CYS37 3.4 0.0 1.0
HB3 A:LYS42 3.4 0.0 1.0
H A:ARG41 3.6 0.0 1.0
HB3 A:CYS37 3.6 0.0 1.0
H A:LYS42 3.7 0.0 1.0
HB2 A:CYS58 3.8 0.0 1.0
HB A:VAL39 4.0 0.0 1.0
HB3 A:CYS61 4.1 0.0 1.0
N A:CYS61 4.1 0.0 1.0
HB3 A:SER60 4.1 0.0 1.0
N A:CYS40 4.1 0.0 1.0
HB2 A:CYS40 4.1 0.0 1.0
N A:CYS58 4.1 0.0 1.0
HD2 A:LYS42 4.1 0.0 1.0
CA A:CYS40 4.2 0.0 1.0
CA A:CYS61 4.3 0.0 1.0
HG22 A:VAL39 4.4 0.0 1.0
CA A:CYS58 4.4 0.0 1.0
N A:ARG41 4.4 0.0 1.0
N A:LYS42 4.5 0.0 1.0
HA A:TYR57 4.5 0.0 1.0
CB A:LYS42 4.5 0.0 1.0
CA A:CYS37 4.8 0.0 1.0
C A:CYS40 4.8 0.0 1.0
H A:SER60 4.9 0.0 1.0
HB2 A:LYS42 4.9 0.0 1.0
H A:VAL39 4.9 0.0 1.0
HA A:CYS61 5.0 0.0 1.0

Reference:

G.Kontaxis, R.Konrat, B.Krautler, R.Weiskirchen, K.Bister. Structure and Intramodular Dynamics of the Amino-Terminal Lim Domain From Quail Cysteine- and Glycine-Rich Protein CRP2. Biochemistry V. 37 7127 1998.
ISSN: ISSN 0006-2960
PubMed: 9585524
DOI: 10.1021/BI973055V
Page generated: Wed Dec 16 02:44:29 2020

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