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Zinc in PDB, part 319 (files: 12721-12760), PDB 5u9t-5ugk

Experimental structures of coordination spheres of Zinc (Zn) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Zinc atoms. PDB files: 12721-12760 (PDB 5u9t-5ugk).
  1. 5u9t (Zn: 6) - The Tris-Thiolate Zn(II)S3CL Binding Site Engineered By D-Cysteine Ligands in De Novo Three-Stranded Coiled Coil Environment
    Other atoms: Cl (2); Na (2);
  2. 5u9u (Zn: 4) - De Novo Three-Stranded Coiled Coil Peptide Containing A Tris-Thiolate Site Engineered By D-Cysteine Ligands
    Other atoms: Cl (1);
  3. 5uac (Zn: 4) - Escherichia Coli Rna Polymerase and Rifampin Complex, Wild-Type
    Other atoms: Mg (2);
  4. 5uag (Zn: 4) - Escherichia Coli Rna Polymerase Mutant - Rpob D516V
    Other atoms: Mg (4);
  5. 5uah (Zn: 4) - Escherichia Coli Rna Polymerase and Rifampin Complex, Rpob D516V Mutant
    Other atoms: Mg (4);
  6. 5uaj (Zn: 4) - Escherichia Coli Rna Polymerase Rpob S531L Mutant
    Other atoms: Mg (2);
  7. 5ual (Zn: 4) - Escherichia Coli Rna Polymerase and Rifampin Complex, Rpob S531L Mutant
    Other atoms: Mg (2);
  8. 5uam (Zn: 2) - Structure of A New Family of Polysaccharide Lyase PL25-Ulvanlyase.
    Other atoms: K (2); Cl (2);
  9. 5uan (Zn: 4) - Crystal Structure of Multi-Domain Rar-Beta-Rxr-Alpha Heterodimer on Dna
  10. 5uaq (Zn: 4) - Escherichia Coli Rna Polymerase Rpob H526Y Mutant
    Other atoms: Mg (2);
  11. 5uas (Zn: 2) - Structure of A New Family of Polysaccharide Lyase PL25-Ulvanlyase Bound to -[Glca(1-4)RHA3S]-
    Other atoms: K (2); Cl (2);
  12. 5ub8 (Zn: 2) - Crystal Structure of YPT31, A Rab Family Gtpase From Candida Albicans, in Complex with Gdp and Zn(II)
  13. 5ub9 (Zn: 2) - Catalytic Core Domain of Adenosine Triphosphate Phosphoribosyltransferase From Campylobacter Jejuni
    Other atoms: Cl (1);
  14. 5ubg (Zn: 5) - Catalytic Core Domain of Adenosine Triphosphate Phosphoribosyltransferase From Campylobacter Jejuni with Bound Phosphoribosyl-Atp
    Other atoms: Cl (1);
  15. 5ubh (Zn: 3) - Catalytic Core Domain of Adenosine Triphosphate Phosphoribosyltransferase From Campylobacter Jejuni with Bound Atp
  16. 5ubi (Zn: 6) - Catalytic Core Domain of Adenosine Triphosphate Phosphoribosyltransferase From Campylobacter Jejuni with Bound Prpp
    Other atoms: Mg (2);
  17. 5uck (Zn: 4) - Class II Fructose-1,6-Bisphosphate Aldolase of Helicobacter Pylori with Cleavage Products
    Other atoms: Na (2);
  18. 5ucn (Zn: 4) - Class II Fructose-1,6-Bisphosphate Aldolase E142A Variant of Helicobacter Pylori with Dhap
    Other atoms: Na (2);
  19. 5ucp (Zn: 6) - Class II Fructose-1,6-Bisphosphate Aldolase E142A Variant of Helicobacter Pylori with Fbp and Cleavage Products
    Other atoms: Na (2);
  20. 5ucs (Zn: 2) - Class II Fructose-1,6-Bisphosphate Aldolase E149A Variant of Helicobacter Pylori
    Other atoms: Na (2);
  21. 5ucz (Zn: 4) - Class II Fructose-1,6-Bisphosphate Aldolase E149A Variant of Helicobacter Pylori with Dhap
    Other atoms: Na (2);
  22. 5ud0 (Zn: 3) - Class II Fructose-1,6-Bisphosphate Aldolase E149A Variant of Helicobacter Pylori with Cleavage Products
    Other atoms: Ca (1); Na (2);
  23. 5ud1 (Zn: 4) - Class II Fructose-1,6-Bisphosphate Aldolase H180Q Variant of Helicobacter Pylori
    Other atoms: Na (2);
  24. 5ud2 (Zn: 4) - Class II Fructose-1,6-Bisphosphate Aldolase H180Q Variant of Helicobacter Pylori with Dhap
    Other atoms: Na (2);
  25. 5ud3 (Zn: 4) - Class II Fructose-1,6-Bisphosphate Aldolase H180Q Variant of Helicobacter Pylori with Fbp
    Other atoms: Na (2);
  26. 5ud4 (Zn: 4) - Class II Fructose-1,6-Bisphosphate Aldolase H180Q Variant of Helicobacter Pylori with Tbp
    Other atoms: Na (2);
  27. 5ud5 (Zn: 2) - Crystal Structure of the Trna Binding Domain of Pyrrolysyl-Trna Synthetase Bound to Trna(Pyl)
  28. 5udh (Zn: 12) - Hhari/ARIH1-UBCH7~Ubiquitin
  29. 5udp (Zn: 2) - High Resolution X-Ray Crystal Structure of Synthetic Insulin Lispro
    Other atoms: Cl (2); Na (1);
  30. 5udx (Zn: 6) - Lare, A Sulfur Transferase Involved in Synthesis of the Cofactor For Lactate Racemase, in Complex with Zinc
  31. 5udy (Zn: 2) - Human Alkaline Sphingomyelinase (Alk-Smase, ENPP7, NPP7)
    Other atoms: I (25); Na (1);
  32. 5udz (Zn: 4) - Human LIN28A in Complex with Let-7F-1 Microrna Pre-Element
  33. 5ue2 (Zn: 32) - Prommp-7 with Heparin Octasaccharide Bridging Between Domains
    Other atoms: Ca (32);
  34. 5ue3 (Zn: 4) - Prommp-9DESFNII
    Other atoms: Ca (5);
  35. 5ue4 (Zn: 4) - Prommp-9DESFNII Complexed to JNJ0966 Inhibitor
    Other atoms: Ca (5);
  36. 5ue5 (Zn: 32) - Prommp-7 with Heparin Octasaccharide Bound to the Catalytic Domain
    Other atoms: Ca (32);
  37. 5ue8 (Zn: 4) - The Crystal Structure of MUNC13-1 C1C2BMUN Domain
    Other atoms: Cl (2);
  38. 5uej (Zn: 5) - 1.30 A Crystal Structure of Dape Enzyme From Neisseria Meningitidis MC58
  39. 5ufl (Zn: 1) - Crystal Structure of A CIP2A Core Domain
  40. 5ugk (Zn: 240) - Zinc-Binding Structure of A Catalytic Amyloid From Solid-State uc(Nmr) Spectroscopy
Page generated: Fri Dec 24 10:29:37 2021

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