Zinc in PDB 9qlm: Solution Structure of the TAF3-Phd Bound to A H3K4ME3Q5SER Histone Tail Peptide with A Serotonylated Glutamine

The binding sites of Zinc atom in the Solution Structure of the TAF3-Phd Bound to A H3K4ME3Q5SER Histone Tail Peptide with A Serotonylated Glutamine (pdb code 9qlm). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Solution Structure of the TAF3-Phd Bound to A H3K4ME3Q5SER Histone Tail Peptide with A Serotonylated Glutamine, PDB code: 9qlm:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the Solution Structure of the TAF3-Phd Bound to A H3K4ME3Q5SER Histone Tail Peptide with A Serotonylated Glutamine


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Solution Structure of the TAF3-Phd Bound to A H3K4ME3Q5SER Histone Tail Peptide with A Serotonylated Glutamine within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn1001 b:15.0 occ:1.00 SG A:CYS885 2.5 15.0 1.0 SG A:CYS914 2.5 15.0 1.0 SG A:CYS888 2.7 15.0 1.0 SG A:CYS911 2.7 15.0 1.0 HB3 A:CYS911 2.7 15.0 1.0 H A:CYS888 2.8 15.0 1.0 HZ3 A:LYS913 2.9 15.0 1.0 HB2 A:CYS914 2.9 15.0 1.0 H A:CYS911 2.9 15.0 1.0 HB2 A:CYS888 3.0 15.0 1.0 HZ2 A:LYS913 3.1 15.0 1.0 CB A:CYS911 3.2 15.0 1.0 HB2 A:CYS885 3.3 15.0 1.0 CB A:CYS885 3.3 15.0 1.0 CB A:CYS914 3.3 15.0 1.0 HB3 A:CYS885 3.3 15.0 1.0 CB A:CYS888 3.4 15.0 1.0 HH A:TYR892 3.4 15.0 1.0 HB3 A:ASP887 3.4 15.0 1.0 H A:CYS914 3.4 15.0 1.0 NZ A:LYS913 3.4 15.0 1.0 N A:CYS888 3.7 15.0 1.0 HZ1 A:LYS913 3.7 15.0 1.0 N A:CYS911 3.7 15.0 1.0 HB3 A:CYS914 4.0 15.0 1.0 CA A:CYS911 4.1 15.0 1.0 OH A:TYR892 4.1 15.0 1.0 HB2 A:CYS911 4.1 15.0 1.0 CA A:CYS888 4.1 15.0 1.0 HB2 A:ASP887 4.1 15.0 1.0 HB2 A:LYS913 4.1 15.0 1.0 N A:CYS914 4.2 15.0 1.0 HZ1 A:LYS917 4.2 15.0 1.0 CB A:ASP887 4.2 15.0 1.0 H A:ASP887 4.3 15.0 1.0 HB3 A:CYS888 4.3 15.0 1.0 CA A:CYS914 4.4 15.0 1.0 HE1 A:TYR892 4.4 15.0 1.0 CZ A:TYR892 4.5 15.0 1.0 HB3 A:PHE910 4.5 15.0 1.0 HA A:PHE910 4.5 15.0 1.0 H A:LYS913 4.6 15.0 1.0 CE1 A:TYR892 4.6 15.0 1.0 HA A:CYS888 4.7 15.0 1.0 C A:ASP887 4.7 15.0 1.0 HD1 A:PHE910 4.8 15.0 1.0 C A:CYS911 4.8 15.0 1.0 CA A:CYS885 4.8 15.0 1.0 CE A:LYS913 4.8 15.0 1.0 HG3 A:LYS913 4.8 15.0 1.0 O A:CYS911 4.8 15.0 1.0 H A:ASP889 4.8 15.0 1.0 C A:PHE910 4.9 15.0 1.0 CA A:ASP887 4.9 15.0 1.0 HE2 A:LYS913 4.9 15.0 1.0 N A:ASP887 5.0 15.0 1.0 HA A:CYS914 5.0 15.0 1.0 HA A:CYS911 5.0 15.0 1.0

Zinc binding site 2 out of 2 in the Solution Structure of the TAF3-Phd Bound to A H3K4ME3Q5SER Histone Tail Peptide with A Serotonylated Glutamine


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Solution Structure of the TAF3-Phd Bound to A H3K4ME3Q5SER Histone Tail Peptide with A Serotonylated Glutamine within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn1002 b:15.0 occ:1.00 HB2 A:HIS893 2.0 15.0 1.0 ND1 A:HIS893 2.4 15.0 1.0 SG A:CYS896 2.4 15.0 1.0 SG A:CYS873 2.6 15.0 1.0 SG A:CYS870 2.7 15.0 1.0 HB3 A:CYS870 2.8 15.0 1.0 CB A:HIS893 2.8 15.0 1.0 CG A:HIS893 2.9 15.0 1.0 H A:CYS873 3.0 15.0 1.0 CB A:CYS870 3.1 15.0 1.0 H A:HIS893 3.2 15.0 1.0 HB2 A:CYS870 3.3 15.0 1.0 HB2 A:CYS896 3.4 15.0 1.0 HB3 A:HIS893 3.5 15.0 1.0 CB A:CYS896 3.5 15.0 1.0 CE1 A:HIS893 3.5 15.0 1.0 HB3 A:CYS873 3.5 15.0 1.0 CB A:CYS873 3.7 15.0 1.0 HB3 A:CYS896 3.7 15.0 1.0 N A:HIS893 3.9 15.0 1.0 N A:CYS873 3.9 15.0 1.0 CA A:HIS893 4.0 15.0 1.0 HE1 A:HIS893 4.0 15.0 1.0 HB2 A:LYS875 4.1 15.0 1.0 CD2 A:HIS893 4.2 15.0 1.0 HA3 A:GLY872 4.4 15.0 1.0 H A:GLY872 4.4 15.0 1.0 H A:LYS875 4.4 15.0 1.0 H A:CYS896 4.4 15.0 1.0 CA A:CYS873 4.4 15.0 1.0 NE2 A:HIS893 4.5 15.0 1.0 HB2 A:CYS873 4.6 15.0 1.0 CA A:CYS870 4.6 15.0 1.0 H A:ASN874 4.6 15.0 1.0 HA A:HIS893 4.7 15.0 1.0 C A:HIS893 4.8 15.0 1.0 CA A:CYS896 4.9 15.0 1.0 HG2 A:PRO895 4.9 15.0 1.0 O A:HIS893 4.9 15.0 1.0 C A:GLY872 4.9 15.0 1.0 CA A:GLY872 5.0 15.0 1.0

L.Pulido-Cortes, H.Gielingh, V.Thijssen, M.Liu, R.Yoshisada, L.R.Soares, N.Sheikh, F.Friedrich, H.Greschik, L.Peng, R.V.Honorato, M.Jung, A.M.J.J.Bonvin, M.L.Biniossek, R.Schule, H.Van Ingen, H.T.M.Timmers, S.Jongkees. Molecular Determinants For Recognition of Serotonylated Chromatin To Be Published.