Zinc in PDB 9byq: Two-Subunit Asymmetric Unit of Epstein-Barr Virus Annealase BALF2 Ssdna-Annealing Complex

The binding sites of Zinc atom in the Two-Subunit Asymmetric Unit of Epstein-Barr Virus Annealase BALF2 Ssdna-Annealing Complex (pdb code 9byq). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Two-Subunit Asymmetric Unit of Epstein-Barr Virus Annealase BALF2 Ssdna-Annealing Complex, PDB code: 9byq:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the Two-Subunit Asymmetric Unit of Epstein-Barr Virus Annealase BALF2 Ssdna-Annealing Complex


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Two-Subunit Asymmetric Unit of Epstein-Barr Virus Annealase BALF2 Ssdna-Annealing Complex within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn2000 b:94.6 occ:1.00 O A:HOH2233 1.9 99.6 1.0 SG A:CYS456 2.0 53.5 1.0 SG A:CYS453 2.0 57.6 1.0 SG A:CYS464 2.4 59.4 1.0 H1 A:HOH2233 2.5 99.6 1.0 H2 A:HOH2233 2.6 99.6 1.0 HG A:CYS456 2.6 53.5 1.0 HG A:CYS453 2.8 57.6 1.0 H A:CYS456 2.9 56.7 1.0 HG A:CYS464 3.2 59.4 1.0 CB A:CYS453 3.2 55.3 1.0 HB2 A:CYS464 3.2 52.0 1.0 CB A:CYS456 3.3 52.3 1.0 HB3 A:CYS453 3.3 60.8 1.0 CB A:CYS464 3.3 48.3 1.0 HB3 A:CYS456 3.4 54.8 1.0 HB2 A:CYS453 3.4 60.6 1.0 HB2 A:LEU455 3.5 53.0 1.0 HB3 A:CYS464 3.6 51.5 1.0 HD21 A:ASN466 3.6 49.8 1.0 N A:CYS456 3.7 57.8 1.0 H A:GLY458 3.7 60.9 1.0 HB2 A:ASN466 3.8 49.3 1.0 CA A:CYS456 4.1 51.7 1.0 HB2 A:CYS456 4.2 55.2 1.0 O A:ALA448 4.2 56.9 1.0 O A:HOH2219 4.2 62.6 1.0 H A:LEU455 4.2 54.0 1.0 HA A:PRO461 4.3 53.2 1.0 HA2 A:GLY458 4.4 60.2 1.0 H1 A:HOH2279 4.4 52.8 1.0 H A:GLU457 4.5 63.7 1.0 CB A:LEU455 4.5 48.9 1.0 ND2 A:ASN466 4.6 49.6 1.0 CA A:CYS453 4.6 57.5 1.0 H2 A:HOH2219 4.6 62.6 1.0 H A:ASN466 4.6 49.2 1.0 N A:GLY458 4.7 61.5 1.0 C A:LEU455 4.7 53.2 1.0 HD12 A:LEU455 4.7 53.9 1.0 CA A:CYS464 4.8 44.5 1.0 C A:CYS456 4.8 52.7 1.0 CB A:ASN466 4.8 45.9 1.0 HA A:CYS453 4.9 61.2 1.0 N A:GLU457 4.9 61.6 1.0 HA A:CYS464 4.9 51.5 1.0 CA A:LEU455 5.0 46.1 1.0 N A:LEU455 5.0 53.6 1.0 HB3 A:LEU455 5.0 52.4 1.0 H1 A:HOH2219 5.0 62.6 1.0

Zinc binding site 2 out of 2 in the Two-Subunit Asymmetric Unit of Epstein-Barr Virus Annealase BALF2 Ssdna-Annealing Complex


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Two-Subunit Asymmetric Unit of Epstein-Barr Virus Annealase BALF2 Ssdna-Annealing Complex within 5.0Å range: probe atom residue distance (Å) B Occ D:Zn2000 b:94.6 occ:1.00 O D:HOH2182 1.7 99.6 1.0 SG D:CYS453 2.3 57.6 1.0 H1 D:HOH2182 2.4 99.6 1.0 H2 D:HOH2182 2.4 99.6 1.0 SG D:CYS456 2.4 53.5 1.0 SG D:CYS464 2.5 59.4 1.0 HG D:CYS453 3.0 57.6 1.0 HG D:CYS456 3.0 53.5 1.0 H D:CYS456 3.3 56.7 1.0 HG D:CYS464 3.3 59.4 1.0 HB2 D:CYS464 3.3 52.0 1.0 CB D:CYS464 3.4 48.3 1.0 CB D:CYS453 3.4 55.3 1.0 HB3 D:CYS453 3.5 60.8 1.0 HB3 D:CYS464 3.5 51.5 1.0 HB2 D:LEU455 3.6 53.0 1.0 HB2 D:CYS453 3.6 60.6 1.0 HB2 D:ASN466 3.8 49.3 1.0 CB D:CYS456 3.8 52.3 1.0 HB3 D:CYS456 3.8 54.8 1.0 HD21 D:ASN466 3.9 49.8 1.0 H D:GLY458 4.0 60.9 1.0 N D:CYS456 4.1 57.8 1.0 O D:ALA448 4.1 56.9 1.0 O D:HOH2212 4.1 62.6 1.0 HA D:PRO461 4.3 53.2 1.0 CA D:CYS456 4.4 51.7 1.0 HA2 D:GLY458 4.5 60.2 1.0 H D:LEU455 4.5 54.0 1.0 H2 D:HOH2212 4.5 62.6 1.0 CB D:LEU455 4.6 48.9 1.0 HB2 D:CYS456 4.6 55.2 1.0 HD12 D:LEU455 4.7 53.9 1.0 H D:ASN466 4.7 49.2 1.0 CA D:CYS453 4.8 57.5 1.0 ND2 D:ASN466 4.8 49.6 1.0 CB D:ASN466 4.8 45.9 1.0 CA D:CYS464 4.8 44.5 1.0 N D:GLY458 4.9 61.5 1.0 H1 D:HOH2212 4.9 62.6 1.0 HA D:ALA448 4.9 56.9 1.0 H D:GLU457 4.9 63.7 1.0

J.Nicholls, J.Brewster, G.Tolun. Structural Determination of BALF2 Annealing Intermediate Reveals the Mechanism Through Which Dna Annealing Occurs To Be Published.