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Zinc in PDB 8wfb: Structure of the DPSPCAS13B-ADAR2-Crrna-Target Rna Complex

Zinc Binding Sites:

The binding sites of Zinc atom in the Structure of the DPSPCAS13B-ADAR2-Crrna-Target Rna Complex (pdb code 8wfb). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Structure of the DPSPCAS13B-ADAR2-Crrna-Target Rna Complex, PDB code: 8wfb:

Zinc binding site 1 out of 1 in 8wfb

Go back to Zinc Binding Sites List in 8wfb
Zinc binding site 1 out of 1 in the Structure of the DPSPCAS13B-ADAR2-Crrna-Target Rna Complex


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Structure of the DPSPCAS13B-ADAR2-Crrna-Target Rna Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn1502

b:345.4
occ:1.00
SG A:CYS1306 2.1 345.4 1.0
O6 C:8AZ23 2.2 345.4 1.0
ND1 A:HIS1184 2.2 345.5 1.0
SG A:CYS1241 2.4 345.3 1.0
CB A:CYS1306 3.1 345.3 1.0
CE1 A:HIS1184 3.1 345.5 1.0
C6 C:8AZ23 3.2 345.4 1.0
CG A:HIS1184 3.2 345.6 1.0
CB A:CYS1241 3.4 345.3 1.0
C5 C:8AZ23 3.5 345.4 1.0
CB A:HIS1184 3.6 345.6 1.0
N1 C:8AZ23 3.6 345.4 1.0
OE2 A:GLU1186 3.6 345.4 1.0
CE A:LYS1273 3.7 345.4 1.0
N A:CYS1241 3.8 345.2 1.0
C4 C:8AZ23 4.0 345.5 1.0
C2 C:8AZ23 4.0 345.5 1.0
NZ A:LYS1273 4.1 345.4 1.0
N A:CYS1306 4.1 345.2 1.0
N7 C:8AZ23 4.1 345.3 1.0
CA A:CYS1306 4.2 345.3 1.0
CA A:CYS1241 4.2 345.2 1.0
NE2 A:HIS1184 4.2 345.6 1.0
N3 C:8AZ23 4.3 345.5 1.0
CD2 A:HIS1184 4.3 345.6 1.0
CD A:GLU1186 4.3 345.4 1.0
OE1 A:GLU1186 4.7 345.5 1.0
N9 C:8AZ23 4.8 345.5 1.0
N8 C:8AZ23 4.8 345.3 1.0
C A:PRO1240 4.9 345.2 1.0
O A:CYS1241 4.9 345.2 1.0

Reference:

J.Ishikawa, J.Ishikawa, K.Kato, K.Yamashita, T.Nishizawa, H.Nishimasu. N/A N/A.
Page generated: Fri Aug 22 15:11:35 2025

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