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Zinc in PDB 8vwc: Cryoem Structure of A Ftsh Helical Assembly in the Aged State

Other elements in 8vwc:

The structure of Cryoem Structure of A Ftsh Helical Assembly in the Aged State also contains other interesting chemical elements:

Magnesium (Mg) 1 atom

Zinc Binding Sites:

The binding sites of Zinc atom in the Cryoem Structure of A Ftsh Helical Assembly in the Aged State (pdb code 8vwc). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Cryoem Structure of A Ftsh Helical Assembly in the Aged State, PDB code: 8vwc:

Zinc binding site 1 out of 1 in 8vwc

Go back to Zinc Binding Sites List in 8vwc
Zinc binding site 1 out of 1 in the Cryoem Structure of A Ftsh Helical Assembly in the Aged State


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Cryoem Structure of A Ftsh Helical Assembly in the Aged State within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn801

b:65.2
occ:1.00
OD2 A:ASP500 2.2 23.4 1.0
NE2 A:HIS423 2.3 17.2 1.0
NE2 A:HIS427 2.3 16.2 1.0
CE1 A:HIS423 3.1 15.0 1.0
CE1 A:HIS427 3.3 13.4 1.0
CD2 A:HIS427 3.3 14.7 1.0
CG A:ASP500 3.3 20.3 1.0
CD2 A:HIS423 3.3 15.9 1.0
OD1 A:ASP500 3.7 24.3 1.0
ND1 A:HIS423 4.2 15.6 1.0
ND1 A:HIS427 4.4 14.5 1.0
CG A:HIS423 4.4 15.1 1.0
CG A:HIS427 4.4 14.8 1.0
CA A:GLY482 4.5 10.7 1.0
CB A:ASP500 4.6 17.8 1.0
O A:GLY496 4.6 19.4 1.0
N A:GLY482 4.9 13.5 1.0

Reference:

Y.Li, J.Zhu, Z.Zhang, J.Wei, F.Wang, G.Meisl, T.P.J.Knowles, E.H.Egelman, F.A.Tezcan. Transforming An Atp-Dependent Enzyme Into A Dissipative, Self-Assembling Material To Be Published.
Page generated: Sun Feb 9 00:53:31 2025

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