Zinc in PDB 8tkz: Structure of Fission Yeast DUF89 Protein Bound to CO2+ and PO4

The structure of Structure of Fission Yeast DUF89 Protein Bound to CO2+ and PO4, PDB code: 8tkz was solved by A.Jacewicz, A.M.Sanchez, S.Shuman, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	28.42 / 2.06
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	55.109, 91.163, 106.813, 90, 90, 90
R / Rfree (%)	17.4 / 22.7

The structure of Structure of Fission Yeast DUF89 Protein Bound to CO2+ and PO4 also contains other interesting chemical elements:

Chlorine	(Cl)	2 atoms
Sodium	(Na)	1 atom
Cobalt	(Co)	1 atom

The binding sites of Zinc atom in the Structure of Fission Yeast DUF89 Protein Bound to CO2+ and PO4 (pdb code 8tkz). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Structure of Fission Yeast DUF89 Protein Bound to CO2+ and PO4, PDB code: 8tkz:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the Structure of Fission Yeast DUF89 Protein Bound to CO2+ and PO4


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Structure of Fission Yeast DUF89 Protein Bound to CO2+ and PO4 within 5.0Å range: probe atom residue distance (Å) B Occ B:Zn510 b:30.9 occ:1.00 N B:SER0 2.0 31.2 1.0 OE1 B:GLU98 2.0 32.8 1.0 OE1 B:GLU101 2.1 30.0 1.0 O B:SER0 2.2 36.7 1.0 C B:SER0 2.8 38.2 1.0 CA B:SER0 2.9 35.6 1.0 CD B:GLU101 3.1 36.3 1.0 CD B:GLU98 3.2 36.1 1.0 OE2 B:GLU101 3.4 40.9 1.0 CB B:SER0 3.5 34.8 1.0 OE2 B:GLU98 3.7 30.7 1.0 OG B:SER0 4.0 42.5 1.0 C2 B:PGE503 4.1 49.7 0.8 N B:MET1 4.1 48.1 1.0 O1 B:PGE503 4.3 46.8 0.8 CG B:GLU98 4.4 33.7 1.0 CG B:GLU101 4.5 29.7 1.0 CA B:GLU98 4.5 30.8 1.0 CB B:GLU98 4.5 25.6 1.0 C B:MET1 4.6 42.6 1.0 CB B:GLU101 4.7 25.9 1.0 C1 B:PGE503 4.7 45.8 0.8 O B:MET1 4.7 36.1 1.0 CA B:MET1 4.8 36.2 1.0 N B:GLY2 4.9 39.2 1.0

Zinc binding site 2 out of 2 in the Structure of Fission Yeast DUF89 Protein Bound to CO2+ and PO4


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Structure of Fission Yeast DUF89 Protein Bound to CO2+ and PO4 within 5.0Å range: probe atom residue distance (Å) B Occ B:Zn511 b:45.7 occ:1.00 NE2 B:HIS426 2.1 43.7 1.0 OE1 B:GLU19 2.1 50.3 1.0 OE2 B:GLU19 2.2 46.8 1.0 CD B:GLU19 2.5 44.8 1.0 CD2 B:HIS426 3.0 36.4 1.0 CE1 B:HIS426 3.1 38.4 1.0 CG B:GLU19 4.0 38.2 1.0 ND1 B:HIS426 4.2 42.0 1.0 CG B:HIS426 4.2 38.2 1.0 CA B:GLU19 4.7 37.0 1.0 CB B:GLU19 4.7 31.5 1.0

A.Jacewicz, A.M.Sanchez, S.Shuman. Structure of Fission Yeast DUF89 Protein Bound to CO2+ and PO4 To Be Published.