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Zinc in PDB 7y8y: Structure of CAS7-11-Crrna-Tgrna in Complex with Tpr-Chat

Zinc Binding Sites:

The binding sites of Zinc atom in the Structure of CAS7-11-Crrna-Tgrna in Complex with Tpr-Chat (pdb code 7y8y). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 4 binding sites of Zinc where determined in the Structure of CAS7-11-Crrna-Tgrna in Complex with Tpr-Chat, PDB code: 7y8y:
Jump to Zinc binding site number: 1; 2; 3; 4;

Zinc binding site 1 out of 4 in 7y8y

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Zinc binding site 1 out of 4 in the Structure of CAS7-11-Crrna-Tgrna in Complex with Tpr-Chat


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Structure of CAS7-11-Crrna-Tgrna in Complex with Tpr-Chat within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn1801

b:88.1
occ:1.00
SG A:CYS503 2.3 32.6 1.0
SG A:CYS491 2.3 41.2 1.0
SG A:CYS506 2.3 33.1 1.0
SG A:CYS501 2.3 36.5 1.0
CB A:CYS503 3.2 10.3 1.0
CB A:CYS501 3.4 17.9 1.0
CB A:CYS491 3.5 28.4 1.0
CB A:CYS506 3.5 18.5 1.0
N A:CYS503 4.0 19.9 1.0
CA A:CYS503 4.2 5.0 1.0
N A:CYS506 4.2 15.1 1.0
CA A:CYS506 4.5 14.6 1.0
CA A:CYS491 4.7 21.7 1.0
CA A:CYS501 4.7 17.1 1.0
N A:CYS491 4.7 17.4 1.0
C A:CYS503 4.8 12.6 1.0
C A:CYS501 4.8 19.5 1.0
N A:ASN502 4.9 18.4 1.0

Zinc binding site 2 out of 4 in 7y8y

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Zinc binding site 2 out of 4 in the Structure of CAS7-11-Crrna-Tgrna in Complex with Tpr-Chat


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Structure of CAS7-11-Crrna-Tgrna in Complex with Tpr-Chat within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn1802

b:111.0
occ:1.00
SG A:CYS1414 2.3 55.8 1.0
SG A:CYS1417 2.3 43.9 1.0
SG A:CYS1018 2.3 67.9 1.0
SG A:CYS1406 2.3 58.4 1.0
CB A:CYS1417 3.2 29.2 1.0
CB A:CYS1018 3.5 68.8 1.0
CB A:CYS1406 3.8 56.3 1.0
CB A:CYS1414 3.9 44.7 1.0
N A:CYS1406 3.9 61.8 1.0
N A:CYS1414 4.3 46.7 1.0
N A:CYS1417 4.3 36.2 1.0
CA A:CYS1417 4.3 30.9 1.0
N A:CYS1018 4.4 64.9 1.0
CA A:CYS1018 4.5 68.6 1.0
CA A:CYS1406 4.5 55.0 1.0
CA A:CYS1414 4.6 46.8 1.0
NH1 A:ARG935 4.7 65.8 1.0
C A:PRO1405 4.9 65.1 1.0
CA A:PRO1405 4.9 61.9 1.0
C A:CYS1018 4.9 67.4 1.0

Zinc binding site 3 out of 4 in 7y8y

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Zinc binding site 3 out of 4 in the Structure of CAS7-11-Crrna-Tgrna in Complex with Tpr-Chat


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 3 of Structure of CAS7-11-Crrna-Tgrna in Complex with Tpr-Chat within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn1803

b:83.5
occ:1.00
SG A:CYS88 2.3 40.4 1.0
SG A:CYS127 2.3 36.9 1.0
SG A:CYS130 2.3 43.4 1.0
SG A:CYS121 2.3 68.0 1.0
CB A:CYS130 3.3 22.9 1.0
CB A:CYS121 3.5 68.2 1.0
CB A:CYS88 3.6 26.1 1.0
CB A:CYS127 3.7 33.0 1.0
N A:CYS127 4.0 39.1 1.0
N A:CYS130 4.2 26.5 1.0
CA A:CYS130 4.4 21.4 1.0
NH1 A:ARG135 4.4 31.0 1.0
CA A:CYS127 4.4 34.1 1.0
N A:CYS88 4.4 32.2 1.0
CA A:CYS88 4.5 26.7 1.0
O A:CYS127 4.9 33.5 1.0
CA A:CYS121 4.9 68.6 1.0
C A:CYS88 4.9 24.4 1.0
N A:GLY90 4.9 17.9 1.0

Zinc binding site 4 out of 4 in 7y8y

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Zinc binding site 4 out of 4 in the Structure of CAS7-11-Crrna-Tgrna in Complex with Tpr-Chat


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 4 of Structure of CAS7-11-Crrna-Tgrna in Complex with Tpr-Chat within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn1804

b:112.3
occ:1.00
ND1 A:HIS747 2.1 65.9 1.0
CE1 A:HIS747 2.3 67.0 1.0
SG A:CYS750 2.3 67.1 1.0
SG A:CYS752 2.3 50.2 1.0
SG A:CYS755 2.3 50.7 1.0
CB A:CYS752 3.2 48.8 1.0
CG A:HIS747 3.3 65.6 1.0
N A:CYS752 3.4 42.1 1.0
CB A:CYS755 3.5 39.7 1.0
NE2 A:HIS747 3.5 68.9 1.0
CB A:CYS750 3.6 57.2 1.0
CA A:CYS752 3.9 48.3 1.0
CD2 A:HIS747 4.0 65.6 1.0
N A:CYS755 4.0 33.8 1.0
CB A:HIS747 4.2 68.1 1.0
C A:CYS750 4.3 61.4 1.0
CA A:CYS755 4.3 31.6 1.0
N A:THR751 4.4 60.7 1.0
O A:CYS750 4.5 60.9 1.0
C A:CYS752 4.5 53.2 1.0
CA A:CYS750 4.6 60.6 1.0
C A:THR751 4.6 55.7 1.0
CD A:LYS744 4.7 59.6 1.0
O A:CYS752 4.8 56.3 1.0
CA A:THR751 4.8 56.8 1.0
CA A:HIS747 5.0 69.0 1.0

Reference:

S.Wang, M.Guo, Y.Zhu, Z.Huang. Structure of CAS7-11-Crrna-Tgrna in Complex with Tpr-Chat To Be Published.
Page generated: Fri Aug 22 07:02:15 2025

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