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Zinc in PDB 7qp3: Pseudogymnoascus Pannorum M36 Protease Without the Propeptide

Protein crystallography data

The structure of Pseudogymnoascus Pannorum M36 Protease Without the Propeptide, PDB code: 7qp3 was solved by C.Wilkens, J.Qiu, A.S.Meyer, J.P.Morth, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 46.93 / 1.85
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 39.08, 67.49, 130.61, 90, 90, 90
R / Rfree (%) 14.9 / 20

Other elements in 7qp3:

The structure of Pseudogymnoascus Pannorum M36 Protease Without the Propeptide also contains other interesting chemical elements:

Calcium (Ca) 5 atoms

Zinc Binding Sites:

The binding sites of Zinc atom in the Pseudogymnoascus Pannorum M36 Protease Without the Propeptide (pdb code 7qp3). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Pseudogymnoascus Pannorum M36 Protease Without the Propeptide, PDB code: 7qp3:

Zinc binding site 1 out of 1 in 7qp3

Go back to Zinc Binding Sites List in 7qp3
Zinc binding site 1 out of 1 in the Pseudogymnoascus Pannorum M36 Protease Without the Propeptide


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Pseudogymnoascus Pannorum M36 Protease Without the Propeptide within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn403

b:20.0
occ:1.00
NE2 A:HIS188 2.0 15.0 1.0
O A:HOH749 2.0 38.0 1.0
NE2 A:HIS184 2.0 20.1 1.0
OE1 A:GLU214 2.0 21.1 1.0
O A:HOH705 2.2 31.8 1.0
CE1 A:HIS188 2.9 15.4 1.0
CD A:GLU214 2.9 18.6 1.0
CD2 A:HIS184 3.0 22.1 1.0
HE1 A:HIS188 3.0 18.4 1.0
CE1 A:HIS184 3.0 21.8 1.0
CD2 A:HIS188 3.0 19.9 1.0
OE2 A:GLU214 3.2 26.8 1.0
HD2 A:HIS184 3.2 26.5 1.0
HE1 A:HIS184 3.2 26.2 1.0
HD2 A:HIS188 3.3 23.8 1.0
HA A:GLU214 3.7 19.5 1.0
O A:HOH519 4.0 37.1 1.0
ND1 A:HIS188 4.0 19.8 1.0
O2S A:EPE401 4.0 33.9 1.0
ND1 A:HIS184 4.1 20.3 1.0
CG A:HIS188 4.1 20.2 1.0
CG A:HIS184 4.1 21.2 1.0
H102 A:EPE401 4.1 38.6 1.0
NE2 A:HIS275 4.3 32.9 1.0
OE1 A:GLU185 4.3 25.6 1.0
CG A:GLU214 4.3 18.5 1.0
OE2 A:GLU185 4.4 29.6 1.0
O A:HOH804 4.4 24.3 1.0
O A:HOH653 4.5 17.0 1.0
O1S A:EPE401 4.5 57.3 1.0
HB3 A:GLU214 4.5 18.1 1.0
CA A:GLU214 4.5 16.3 1.0
S A:EPE401 4.6 69.0 1.0
CD A:GLU185 4.7 29.6 1.0
HD2 A:HIS275 4.7 33.2 1.0
CB A:GLU214 4.7 15.1 1.0
O A:HOH849 4.7 34.9 1.0
HG3 A:GLU214 4.8 22.2 1.0
HD1 A:HIS188 4.8 23.7 1.0
C10 A:EPE401 4.8 32.2 1.0
HH22 A:ARG250 4.8 26.2 1.0
HA A:GLU185 4.8 20.8 1.0
CD2 A:HIS275 4.9 27.7 1.0
HD1 A:HIS184 4.9 24.3 1.0
HG2 A:GLU214 4.9 22.2 1.0

Reference:

C.Wilkens, J.Qiu, A.S.Meyer, J.P.Morth. Phaeosphaeria Nodorum M36 Protease Without the Propeptide To Be Published.
Page generated: Fri Aug 22 03:58:00 2025

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