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Zinc in PDB 7d6l: Crystal Structure of TRX2 From D. Radiodurans R1

Protein crystallography data

The structure of Crystal Structure of TRX2 From D. Radiodurans R1, PDB code: 7d6l was solved by M.-K.Kim, J.Zhang, L.Zhao, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 18.94 / 1.95
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 101.887, 57.819, 36.152, 90, 94.78, 90
R / Rfree (%) 19.1 / 22.7

Zinc Binding Sites:

The binding sites of Zinc atom in the Crystal Structure of TRX2 From D. Radiodurans R1 (pdb code 7d6l). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of TRX2 From D. Radiodurans R1, PDB code: 7d6l:

Zinc binding site 1 out of 1 in 7d6l

Go back to Zinc Binding Sites List in 7d6l
Zinc binding site 1 out of 1 in the Crystal Structure of TRX2 From D. Radiodurans R1


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of TRX2 From D. Radiodurans R1 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn201

b:25.7
occ:1.00
SG A:CYS30 2.2 26.9 1.0
SG A:CYS10 2.3 30.7 1.0
SG A:CYS7 2.3 27.1 1.0
SG A:CYS27 2.4 24.9 1.0
CB A:CYS27 3.1 18.3 1.0
CB A:CYS7 3.1 20.0 1.0
CB A:CYS30 3.3 26.1 1.0
CB A:CYS10 3.3 35.2 1.0
N A:CYS10 3.7 33.4 1.0
N A:CYS30 3.8 25.1 1.0
CA A:CYS10 4.1 26.1 1.0
CA A:CYS30 4.1 29.6 1.0
CB A:ALA12 4.4 26.5 1.0
CA A:CYS7 4.6 17.7 1.0
CA A:CYS27 4.6 23.1 1.0
C A:CYS10 4.7 32.5 1.0
CB A:ARG29 4.7 25.9 1.0
C A:CYS30 4.7 30.0 1.0
N A:ALA12 4.7 32.4 1.0
C A:HIS9 4.8 32.3 1.0
CB A:HIS9 4.8 27.2 1.0
N A:GLN11 4.8 30.2 1.0
N A:GLY31 4.8 30.4 1.0
C A:ARG29 4.9 36.2 1.0
CB A:ALA32 4.9 24.1 1.0
N A:ALA32 4.9 25.0 1.0

Reference:

M.-K.Kim, J.Zhang, L.Zhao. Crystal Structure of TRX2 From D. Radiodurans R1 To Be Published.
Page generated: Thu Aug 21 23:23:23 2025

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