Zinc in PDB 7d6a: Crystal Structure of Oryza Sativa OS4BGLU18 Monolignol Beta- Glucosidase

All present enzymatic activity of Crystal Structure of Oryza Sativa OS4BGLU18 Monolignol Beta- Glucosidase:
3.2.1.21;

The structure of Crystal Structure of Oryza Sativa OS4BGLU18 Monolignol Beta- Glucosidase, PDB code: 7d6a was solved by S.Baiya, S.Pengthaisong, J.R.Ketudat Cairns, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	30.00 / 1.70
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	52.134, 83.759, 207.649, 90, 90, 90
R / Rfree (%)	15 / 17.5

The binding sites of Zinc atom in the Crystal Structure of Oryza Sativa OS4BGLU18 Monolignol Beta- Glucosidase (pdb code 7d6a). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of Oryza Sativa OS4BGLU18 Monolignol Beta- Glucosidase, PDB code: 7d6a:

Zinc binding site 1 out of 1 in the Crystal Structure of Oryza Sativa OS4BGLU18 Monolignol Beta- Glucosidase


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of Oryza Sativa OS4BGLU18 Monolignol Beta- Glucosidase within 5.0Å range: probe atom residue distance (Å) B Occ B:Zn601 b:14.8 occ:1.00 OE1 A:GLU53 1.9 16.6 1.0 OD2 B:ASP82 1.9 14.1 1.0 NE2 A:HIS85 2.1 13.9 1.0 ND1 B:HIS85 2.1 14.9 1.0 OD1 B:ASP82 2.6 13.2 1.0 CG B:ASP82 2.6 13.7 1.0 CD A:GLU53 2.8 16.8 1.0 OE2 A:GLU53 2.9 17.8 1.0 CD2 A:HIS85 3.0 13.6 1.0 CE1 A:HIS85 3.0 14.0 1.0 CG B:HIS85 3.1 15.2 1.0 CE1 B:HIS85 3.1 14.8 1.0 CB B:HIS85 3.4 15.2 1.0 CB B:ASP82 4.1 13.5 1.0 ND1 A:HIS85 4.1 13.8 1.0 CG A:HIS85 4.2 13.3 1.0 CG A:GLU53 4.2 16.4 1.0 NE2 B:HIS85 4.2 15.2 1.0 CD2 B:HIS85 4.2 15.1 1.0 CE2 A:TYR84 4.3 13.9 1.0 CD2 A:TYR84 4.4 13.7 1.0 NE B:ARG86 4.5 18.6 1.0 O B:HOH869 4.6 14.8 1.0 O A:HOH714 4.7 21.1 1.0 CB A:GLU53 4.7 16.3 1.0 O B:HOH855 4.7 14.2 1.0 O B:ASP82 4.8 13.4 1.0 CA B:HIS85 4.9 15.6 1.0 NH2 B:ARG86 5.0 20.5 1.0

S.Baiya, S.Pengthaisong, J.R.Ketudat Cairns. Crystal Structure of Oryza Sativa OS4BGLU18 Monolignol Beta-Glucosidase Plos One 2021.
ISSN: ESSN 1932-6203