Zinc in PDB 7cma: Structure of A151R From African Swine Fever Virus Georgia

The structure of Structure of A151R From African Swine Fever Virus Georgia, PDB code: 7cma was solved by D.Niu, K.Liu, J.Huang, C.Chen, W.Liu, R.Guo, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	24.49 / 2.01
Space group	P 32
Cell size a, b, c (Å), α, β, γ (°)	49.869, 49.869, 128.081, 90, 90, 120
R / Rfree (%)	24.9 / 25.9

The binding sites of Zinc atom in the Structure of A151R From African Swine Fever Virus Georgia (pdb code 7cma). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Structure of A151R From African Swine Fever Virus Georgia, PDB code: 7cma:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the Structure of A151R From African Swine Fever Virus Georgia


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Structure of A151R From African Swine Fever Virus Georgia within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn201 b:56.3 occ:1.00 ND1 A:HIS109 2.2 50.5 1.0 SG A:CYS116 2.3 85.5 1.0 SG A:CYS142 2.3 70.3 1.0 SG A:CYS139 2.4 95.9 1.0 CB A:CYS116 2.9 59.4 1.0 CE1 A:HIS109 3.0 51.0 1.0 CB A:CYS139 3.1 66.3 1.0 CB A:CYS142 3.2 56.6 1.0 CG A:HIS109 3.4 50.6 1.0 CB A:HIS109 3.8 44.9 1.0 N A:CYS142 3.9 51.1 1.0 CA A:CYS142 4.1 51.9 1.0 NE2 A:HIS109 4.2 47.6 1.0 CA A:CYS116 4.4 59.7 1.0 CD2 A:HIS109 4.4 55.6 1.0 CA A:HIS109 4.5 45.0 1.0 CA A:CYS139 4.5 53.6 1.0 CB A:LYS141 4.7 69.9 1.0 C A:LYS141 4.8 49.2 1.0 N A:CYS116 4.9 52.1 1.0 O A:CYS139 4.9 48.7 1.0 C A:CYS139 4.9 45.6 1.0

Zinc binding site 2 out of 2 in the Structure of A151R From African Swine Fever Virus Georgia


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Structure of A151R From African Swine Fever Virus Georgia within 5.0Å range: probe atom residue distance (Å) B Occ C:Zn201 b:51.9 occ:1.00 ND1 C:HIS109 2.1 48.0 1.0 SG C:CYS142 2.4 70.8 1.0 SG C:CYS139 2.4 103.8 1.0 SG C:CYS116 2.4 89.0 1.0 CB C:CYS139 2.5 66.6 1.0 CB C:CYS116 3.0 65.1 1.0 CE1 C:HIS109 3.0 48.5 1.0 CG C:HIS109 3.2 48.2 1.0 CB C:CYS142 3.2 57.2 1.0 CB C:HIS109 3.6 43.5 1.0 N C:CYS142 4.0 49.1 1.0 CA C:CYS139 4.0 55.9 1.0 NE2 C:HIS109 4.2 43.5 1.0 CA C:CYS142 4.2 50.8 1.0 CA C:HIS109 4.2 44.8 1.0 CD2 C:HIS109 4.3 51.8 1.0 CA C:CYS116 4.5 62.5 1.0 C C:CYS139 4.7 47.1 1.0 O C:CYS139 4.8 46.8 1.0 N C:CYS139 4.8 56.1 1.0 O C:TYR108 4.9 38.0 1.0 C C:LYS141 5.0 49.0 1.0

J.W.Huang, D.Niu, K.Liu, Q.Wang, L.Ma, C.C.Chen, L.Zhang, W.Liu, S.Zhou, J.Min, S.Wu, Y.Yang, R.T.Guo. Structure Basis of Non-Structural Protein PA151R From African Swine Fever Virus. Biochem.Biophys.Res.Commun. V. 532 108 2020.
ISSN: ESSN 1090-2104
PubMed: 32828542
DOI: 10.1016/J.BBRC.2020.08.011