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Zinc in PDB 6zkn: Complex I Inhibited By Rotenone, OPEN3

Enzymatic activity of Complex I Inhibited By Rotenone, OPEN3

All present enzymatic activity of Complex I Inhibited By Rotenone, OPEN3:
1.6.99.3; 7.1.1.2;

Other elements in 6zkn:

The structure of Complex I Inhibited By Rotenone, OPEN3 also contains other interesting chemical elements:

Potassium (K) 1 atom
Iron (Fe) 28 atoms

Zinc Binding Sites:

The binding sites of Zinc atom in the Complex I Inhibited By Rotenone, OPEN3 (pdb code 6zkn). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Complex I Inhibited By Rotenone, OPEN3, PDB code: 6zkn:

Zinc binding site 1 out of 1 in 6zkn

Go back to Zinc Binding Sites List in 6zkn
Zinc binding site 1 out of 1 in the Complex I Inhibited By Rotenone, OPEN3


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Complex I Inhibited By Rotenone, OPEN3 within 5.0Å range:
probe atom residue distance (Å) B Occ
b:Zn300

b:33.3
occ:1.00
NE2 b:HIS68 2.0 50.3 1.0
SG b:CYS87 2.3 31.9 1.0
SG b:CYS84 2.3 26.5 1.0
SG b:CYS59 2.3 35.5 1.0
CE1 b:HIS68 2.8 36.2 1.0
CD2 b:HIS68 3.1 35.6 1.0
CB b:CYS84 3.3 28.1 1.0
CB b:CYS59 3.4 26.7 1.0
CB b:CYS87 3.4 23.3 1.0
N b:GLY61 3.6 30.0 1.0
ND1 b:HIS68 3.9 28.3 1.0
N b:CYS87 4.0 23.0 1.0
CA b:GLY61 4.0 32.7 1.0
C b:CYS59 4.1 22.6 1.0
CG b:HIS68 4.1 37.3 1.0
O b:CYS59 4.3 27.5 1.0
CA b:CYS87 4.3 22.1 1.0
N b:ASP60 4.3 27.3 1.0
CA b:CYS59 4.3 27.0 1.0
C b:ASP60 4.3 25.7 1.0
CB b:TYR86 4.6 18.4 1.0
CA b:ASP60 4.6 29.4 1.0
CA b:CYS84 4.7 30.2 1.0
CG2 b:VAL71 5.0 17.6 1.0
C b:TYR86 5.0 20.7 1.0

Reference:

D.Kampjut, L.A.Sazanov. The Coupling Mechanism of Mammalian Respiratory Complex I. Science V. 370 2020.
ISSN: ESSN 1095-9203
PubMed: 32972993
DOI: 10.1126/SCIENCE.ABC4209
Page generated: Tue Oct 29 15:46:00 2024

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