Zinc in PDB 6zjo: Crystal Structure of Staphylococcus Aureus Rsga.

The structure of Crystal Structure of Staphylococcus Aureus Rsga., PDB code: 6zjo was solved by D.J.Bennison, J.B.Rafferty, R.M.Corrigan, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	47.20 / 2.01
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	54.671, 93.566, 68.177, 90, 90.71, 90
R / Rfree (%)	22.4 / 27.8

The binding sites of Zinc atom in the Crystal Structure of Staphylococcus Aureus Rsga. (pdb code 6zjo). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Crystal Structure of Staphylococcus Aureus Rsga., PDB code: 6zjo:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the Crystal Structure of Staphylococcus Aureus Rsga.


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of Staphylococcus Aureus Rsga. within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn301 b:35.4 occ:1.00 ND1 A:HIS252 2.2 31.1 1.0 SG A:CYS245 2.2 34.0 1.0 SG A:CYS258 2.3 33.4 1.0 SG A:CYS250 2.4 35.4 1.0 CG A:HIS252 3.1 32.9 1.0 CE1 A:HIS252 3.2 30.9 1.0 CB A:CYS245 3.2 42.2 1.0 CB A:CYS250 3.3 34.9 1.0 CB A:HIS252 3.4 32.7 1.0 CA A:HIS252 3.4 34.3 1.0 CB A:CYS258 3.4 39.1 1.0 N A:HIS252 3.6 33.4 1.0 CA A:CYS258 3.8 39.9 1.0 CD2 A:HIS252 4.3 32.2 1.0 N A:ASN259 4.3 39.3 1.0 NE2 A:HIS252 4.3 27.7 1.0 O A:CYS250 4.3 38.3 1.0 C A:CYS258 4.3 38.6 1.0 C A:CYS250 4.3 40.1 1.0 N A:VAL260 4.4 41.0 1.0 CB A:VAL260 4.4 36.2 1.0 CG2 A:VAL260 4.4 35.4 1.0 CA A:CYS250 4.4 36.4 1.0 CA A:CYS245 4.5 44.0 1.0 C A:ASN251 4.7 33.1 1.0 C A:HIS252 4.8 34.9 1.0 N A:ASN251 4.9 37.1 1.0 CA A:VAL260 5.0 41.6 1.0

Zinc binding site 2 out of 2 in the Crystal Structure of Staphylococcus Aureus Rsga.


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Crystal Structure of Staphylococcus Aureus Rsga. within 5.0Å range: probe atom residue distance (Å) B Occ B:Zn301 b:34.6 occ:1.00 ND1 B:HIS252 2.1 35.0 1.0 SG B:CYS250 2.3 34.0 1.0 SG B:CYS258 2.3 33.2 1.0 SG B:CYS245 2.3 40.2 1.0 CE1 B:HIS252 2.9 33.4 1.0 CG B:HIS252 3.2 33.1 1.0 CB B:CYS250 3.3 34.5 1.0 CB B:CYS245 3.3 43.2 1.0 CB B:CYS258 3.5 36.7 1.0 CA B:HIS252 3.6 33.3 1.0 CB B:HIS252 3.7 35.0 1.0 CA B:CYS258 3.7 36.9 1.0 N B:HIS252 3.8 31.4 1.0 NE2 B:HIS252 4.1 31.9 1.0 N B:ASN259 4.2 34.4 1.0 CD2 B:HIS252 4.3 33.9 1.0 O B:HOH429 4.3 30.4 1.0 C B:CYS258 4.3 38.5 1.0 N B:VAL260 4.4 33.8 1.0 O B:CYS250 4.4 31.7 1.0 C B:CYS250 4.4 34.8 1.0 CB B:VAL260 4.4 31.7 1.0 CG2 B:VAL260 4.4 33.5 1.0 CA B:CYS250 4.4 33.9 1.0 CA B:CYS245 4.6 42.4 1.0 C B:ASN251 4.9 32.6 1.0 N B:ASN251 4.9 31.4 1.0

D.J.Bennison, J.A.Nakamoto, T.D.Craggs, P.Milon, J.B.Rafferty, R.M.Corrigan. Control of Ribosome Biogenesis Via Interactions of the Stringent Response Alarmones (P)Ppgpp with Ra-Gtpases in Staphylococcus Aureus To Be Published.