Zinc in PDB 6z0v: Cryoem Structure of the Chikungunya Virus NSP1 Complex
Enzymatic activity of Cryoem Structure of the Chikungunya Virus NSP1 Complex
Zinc Binding Sites:
Pages:
>>> Page 1 <<<
Page 2, Binding sites: 11 -
12;
Binding sites:
The binding sites of Zinc atom in the Cryoem Structure of the Chikungunya Virus NSP1 Complex
(pdb code 6z0v). This binding sites where shown within
5.0 Angstroms radius around Zinc atom.
In total 12 binding sites of Zinc where determined in the
Cryoem Structure of the Chikungunya Virus NSP1 Complex, PDB code: 6z0v:
Jump to Zinc binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
9;
10;
Zinc binding site 1 out
of 12 in 6z0v
Go back to
Zinc Binding Sites List in 6z0v
Zinc binding site 1 out
of 12 in the Cryoem Structure of the Chikungunya Virus NSP1 Complex
 Mono view
 Stereo pair view
|
|
A full contact list of Zinc with other atoms in the Zn binding
site number 1 of Cryoem Structure of the Chikungunya Virus NSP1 Complex within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Zn1001
b:87.0
occ:1.00
|
OE2
|
A:GLU129
|
1.8
|
66.7
|
1.0
|
|
NE2
|
A:HIS79
|
2.0
|
61.4
|
1.0
|
|
SG
|
A:CYS141
|
2.4
|
58.9
|
1.0
|
|
SG
|
A:CYS134
|
2.4
|
66.0
|
1.0
|
|
CB
|
A:CYS134
|
2.4
|
66.0
|
1.0
|
|
CE1
|
A:HIS79
|
2.9
|
61.4
|
1.0
|
|
CD2
|
A:HIS79
|
3.0
|
61.4
|
1.0
|
|
CD
|
A:GLU129
|
3.0
|
66.7
|
1.0
|
|
CB
|
A:CYS141
|
3.4
|
58.9
|
1.0
|
|
CG2
|
A:VAL81
|
3.5
|
60.2
|
1.0
|
|
OE1
|
A:GLU129
|
3.6
|
66.7
|
1.0
|
|
CA
|
A:CYS134
|
3.9
|
66.0
|
1.0
|
|
ND1
|
A:HIS79
|
4.0
|
61.4
|
1.0
|
|
CG
|
A:HIS79
|
4.1
|
61.4
|
1.0
|
|
CB
|
A:GLN143
|
4.2
|
58.7
|
1.0
|
|
CG
|
A:GLU129
|
4.2
|
66.7
|
1.0
|
|
CA
|
A:CYS141
|
4.3
|
58.9
|
1.0
|
|
CB
|
A:VAL81
|
4.3
|
60.2
|
1.0
|
|
CG1
|
A:VAL81
|
4.4
|
60.2
|
1.0
|
|
CA
|
A:VAL81
|
4.5
|
60.2
|
1.0
|
|
N
|
A:ARG142
|
4.6
|
60.9
|
1.0
|
|
N
|
A:CYS134
|
4.6
|
66.0
|
1.0
|
|
N
|
A:GLN143
|
4.7
|
58.7
|
1.0
|
|
O
|
A:PHE133
|
4.7
|
67.6
|
1.0
|
|
C
|
A:CYS134
|
4.9
|
66.0
|
1.0
|
|
C
|
A:PHE133
|
4.9
|
67.6
|
1.0
|
|
C
|
A:CYS141
|
4.9
|
58.9
|
1.0
|
|
Zinc binding site 2 out
of 12 in 6z0v
Go back to
Zinc Binding Sites List in 6z0v
Zinc binding site 2 out
of 12 in the Cryoem Structure of the Chikungunya Virus NSP1 Complex
 Mono view
 Stereo pair view
|
|
A full contact list of Zinc with other atoms in the Zn binding
site number 2 of Cryoem Structure of the Chikungunya Virus NSP1 Complex within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Zn1001
b:79.9
occ:1.00
|
OE2
|
C:GLU129
|
1.8
|
67.1
|
1.0
|
|
NE2
|
C:HIS79
|
2.0
|
58.7
|
1.0
|
|
SG
|
C:CYS141
|
2.4
|
55.0
|
1.0
|
|
SG
|
C:CYS134
|
2.4
|
63.7
|
1.0
|
|
CB
|
C:CYS134
|
2.5
|
63.7
|
1.0
|
|
CE1
|
C:HIS79
|
2.9
|
58.7
|
1.0
|
|
CD2
|
C:HIS79
|
2.9
|
58.7
|
1.0
|
|
CD
|
C:GLU129
|
3.0
|
67.1
|
1.0
|
|
CB
|
C:CYS141
|
3.4
|
55.0
|
1.0
|
|
CG2
|
C:VAL81
|
3.4
|
58.3
|
1.0
|
|
OE1
|
C:GLU129
|
3.6
|
67.1
|
1.0
|
|
CA
|
C:CYS134
|
3.9
|
63.7
|
1.0
|
|
ND1
|
C:HIS79
|
4.0
|
58.7
|
1.0
|
|
CG
|
C:HIS79
|
4.1
|
58.7
|
1.0
|
|
CB
|
C:GLN143
|
4.1
|
58.1
|
1.0
|
|
CG
|
C:GLU129
|
4.1
|
67.1
|
1.0
|
|
CA
|
C:CYS141
|
4.3
|
55.0
|
1.0
|
|
CB
|
C:VAL81
|
4.3
|
58.3
|
1.0
|
|
CG1
|
C:VAL81
|
4.4
|
58.3
|
1.0
|
|
CA
|
C:VAL81
|
4.5
|
58.3
|
1.0
|
|
N
|
C:ARG142
|
4.6
|
59.5
|
1.0
|
|
N
|
C:CYS134
|
4.6
|
63.7
|
1.0
|
|
N
|
C:GLN143
|
4.7
|
58.1
|
1.0
|
|
O
|
C:PHE133
|
4.7
|
66.2
|
1.0
|
|
C
|
C:CYS134
|
4.9
|
63.7
|
1.0
|
|
C
|
C:PHE133
|
4.9
|
66.2
|
1.0
|
|
C
|
C:CYS141
|
4.9
|
55.0
|
1.0
|
|
Zinc binding site 3 out
of 12 in 6z0v
Go back to
Zinc Binding Sites List in 6z0v
Zinc binding site 3 out
of 12 in the Cryoem Structure of the Chikungunya Virus NSP1 Complex
 Mono view
 Stereo pair view
|
|
A full contact list of Zinc with other atoms in the Zn binding
site number 3 of Cryoem Structure of the Chikungunya Virus NSP1 Complex within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
E:Zn1001
b:78.8
occ:1.00
|
OE2
|
E:GLU129
|
1.8
|
67.9
|
1.0
|
|
NE2
|
E:HIS79
|
1.9
|
58.1
|
1.0
|
|
SG
|
E:CYS141
|
2.3
|
57.5
|
1.0
|
|
CB
|
E:CYS134
|
2.4
|
64.6
|
1.0
|
|
SG
|
E:CYS134
|
2.4
|
64.6
|
1.0
|
|
CE1
|
E:HIS79
|
2.9
|
58.1
|
1.0
|
|
CD2
|
E:HIS79
|
3.0
|
58.1
|
1.0
|
|
CD
|
E:GLU129
|
3.0
|
67.9
|
1.0
|
|
CB
|
E:CYS141
|
3.4
|
57.5
|
1.0
|
|
CG2
|
E:VAL81
|
3.5
|
57.8
|
1.0
|
|
OE1
|
E:GLU129
|
3.6
|
67.9
|
1.0
|
|
CA
|
E:CYS134
|
3.9
|
64.6
|
1.0
|
|
ND1
|
E:HIS79
|
4.0
|
58.1
|
1.0
|
|
CG
|
E:HIS79
|
4.1
|
58.1
|
1.0
|
|
CB
|
E:GLN143
|
4.1
|
58.6
|
1.0
|
|
CG
|
E:GLU129
|
4.2
|
67.9
|
1.0
|
|
CA
|
E:CYS141
|
4.3
|
57.5
|
1.0
|
|
CB
|
E:VAL81
|
4.3
|
57.8
|
1.0
|
|
CG1
|
E:VAL81
|
4.4
|
57.8
|
1.0
|
|
CA
|
E:VAL81
|
4.5
|
57.8
|
1.0
|
|
N
|
E:CYS134
|
4.6
|
64.6
|
1.0
|
|
N
|
E:ARG142
|
4.6
|
61.0
|
1.0
|
|
O
|
E:PHE133
|
4.7
|
66.1
|
1.0
|
|
N
|
E:GLN143
|
4.7
|
58.6
|
1.0
|
|
C
|
E:CYS134
|
4.8
|
64.6
|
1.0
|
|
C
|
E:PHE133
|
4.9
|
66.1
|
1.0
|
|
C
|
E:CYS141
|
4.9
|
57.5
|
1.0
|
|
Zinc binding site 4 out
of 12 in 6z0v
Go back to
Zinc Binding Sites List in 6z0v
Zinc binding site 4 out
of 12 in the Cryoem Structure of the Chikungunya Virus NSP1 Complex
 Mono view
 Stereo pair view
|
|
A full contact list of Zinc with other atoms in the Zn binding
site number 4 of Cryoem Structure of the Chikungunya Virus NSP1 Complex within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
G:Zn1001
b:86.9
occ:1.00
|
OE2
|
G:GLU129
|
1.8
|
66.5
|
1.0
|
|
NE2
|
G:HIS79
|
2.0
|
61.1
|
1.0
|
|
SG
|
G:CYS141
|
2.4
|
58.7
|
1.0
|
|
SG
|
G:CYS134
|
2.4
|
66.0
|
1.0
|
|
CB
|
G:CYS134
|
2.4
|
66.0
|
1.0
|
|
CE1
|
G:HIS79
|
2.9
|
61.1
|
1.0
|
|
CD2
|
G:HIS79
|
3.0
|
61.1
|
1.0
|
|
CD
|
G:GLU129
|
3.0
|
66.5
|
1.0
|
|
CB
|
G:CYS141
|
3.4
|
58.7
|
1.0
|
|
CG2
|
G:VAL81
|
3.5
|
60.5
|
1.0
|
|
OE1
|
G:GLU129
|
3.6
|
66.5
|
1.0
|
|
CA
|
G:CYS134
|
3.9
|
66.0
|
1.0
|
|
ND1
|
G:HIS79
|
4.0
|
61.1
|
1.0
|
|
CG
|
G:HIS79
|
4.1
|
61.1
|
1.0
|
|
CB
|
G:GLN143
|
4.2
|
58.9
|
1.0
|
|
CG
|
G:GLU129
|
4.2
|
66.5
|
1.0
|
|
CA
|
G:CYS141
|
4.3
|
58.7
|
1.0
|
|
CB
|
G:VAL81
|
4.3
|
60.5
|
1.0
|
|
CG1
|
G:VAL81
|
4.4
|
60.5
|
1.0
|
|
CA
|
G:VAL81
|
4.5
|
60.5
|
1.0
|
|
N
|
G:ARG142
|
4.6
|
60.7
|
1.0
|
|
N
|
G:CYS134
|
4.6
|
66.0
|
1.0
|
|
N
|
G:GLN143
|
4.7
|
58.9
|
1.0
|
|
O
|
G:PHE133
|
4.7
|
67.7
|
1.0
|
|
C
|
G:CYS134
|
4.9
|
66.0
|
1.0
|
|
C
|
G:PHE133
|
4.9
|
67.7
|
1.0
|
|
C
|
G:CYS141
|
4.9
|
58.7
|
1.0
|
|
Zinc binding site 5 out
of 12 in 6z0v
Go back to
Zinc Binding Sites List in 6z0v
Zinc binding site 5 out
of 12 in the Cryoem Structure of the Chikungunya Virus NSP1 Complex
 Mono view
 Stereo pair view
|
|
A full contact list of Zinc with other atoms in the Zn binding
site number 5 of Cryoem Structure of the Chikungunya Virus NSP1 Complex within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
I:Zn1001
b:79.7
occ:1.00
|
OE2
|
I:GLU129
|
1.8
|
66.7
|
1.0
|
|
NE2
|
I:HIS79
|
2.0
|
58.5
|
1.0
|
|
SG
|
I:CYS141
|
2.4
|
55.0
|
1.0
|
|
SG
|
I:CYS134
|
2.4
|
64.1
|
1.0
|
|
CB
|
I:CYS134
|
2.4
|
64.1
|
1.0
|
|
CE1
|
I:HIS79
|
2.9
|
58.5
|
1.0
|
|
CD2
|
I:HIS79
|
2.9
|
58.5
|
1.0
|
|
CD
|
I:GLU129
|
3.0
|
66.7
|
1.0
|
|
CB
|
I:CYS141
|
3.4
|
55.0
|
1.0
|
|
CG2
|
I:VAL81
|
3.4
|
58.4
|
1.0
|
|
OE1
|
I:GLU129
|
3.6
|
66.7
|
1.0
|
|
CA
|
I:CYS134
|
3.9
|
64.1
|
1.0
|
|
ND1
|
I:HIS79
|
4.0
|
58.5
|
1.0
|
|
CG
|
I:HIS79
|
4.1
|
58.5
|
1.0
|
|
CB
|
I:GLN143
|
4.1
|
58.0
|
1.0
|
|
CG
|
I:GLU129
|
4.1
|
66.7
|
1.0
|
|
CA
|
I:CYS141
|
4.3
|
55.0
|
1.0
|
|
CB
|
I:VAL81
|
4.3
|
58.4
|
1.0
|
|
CG1
|
I:VAL81
|
4.4
|
58.4
|
1.0
|
|
CA
|
I:VAL81
|
4.5
|
58.4
|
1.0
|
|
N
|
I:ARG142
|
4.6
|
59.4
|
1.0
|
|
N
|
I:CYS134
|
4.6
|
64.1
|
1.0
|
|
N
|
I:GLN143
|
4.7
|
58.0
|
1.0
|
|
O
|
I:PHE133
|
4.7
|
66.3
|
1.0
|
|
C
|
I:CYS134
|
4.9
|
64.1
|
1.0
|
|
C
|
I:PHE133
|
4.9
|
66.3
|
1.0
|
|
C
|
I:CYS141
|
4.9
|
55.0
|
1.0
|
|
Zinc binding site 6 out
of 12 in 6z0v
Go back to
Zinc Binding Sites List in 6z0v
Zinc binding site 6 out
of 12 in the Cryoem Structure of the Chikungunya Virus NSP1 Complex
 Mono view
 Stereo pair view
|
|
A full contact list of Zinc with other atoms in the Zn binding
site number 6 of Cryoem Structure of the Chikungunya Virus NSP1 Complex within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
K:Zn1001
b:78.2
occ:1.00
|
OE2
|
K:GLU129
|
1.8
|
67.6
|
1.0
|
|
NE2
|
K:HIS79
|
1.9
|
58.1
|
1.0
|
|
SG
|
K:CYS141
|
2.4
|
57.4
|
1.0
|
|
CB
|
K:CYS134
|
2.4
|
64.6
|
1.0
|
|
SG
|
K:CYS134
|
2.4
|
64.6
|
1.0
|
|
CE1
|
K:HIS79
|
2.9
|
58.1
|
1.0
|
|
CD2
|
K:HIS79
|
3.0
|
58.1
|
1.0
|
|
CD
|
K:GLU129
|
3.0
|
67.6
|
1.0
|
|
CB
|
K:CYS141
|
3.4
|
57.4
|
1.0
|
|
CG2
|
K:VAL81
|
3.5
|
58.1
|
1.0
|
|
OE1
|
K:GLU129
|
3.6
|
67.6
|
1.0
|
|
CA
|
K:CYS134
|
3.9
|
64.6
|
1.0
|
|
ND1
|
K:HIS79
|
4.0
|
58.1
|
1.0
|
|
CG
|
K:HIS79
|
4.1
|
58.1
|
1.0
|
|
CB
|
K:GLN143
|
4.1
|
58.7
|
1.0
|
|
CG
|
K:GLU129
|
4.2
|
67.6
|
1.0
|
|
CA
|
K:CYS141
|
4.3
|
57.4
|
1.0
|
|
CB
|
K:VAL81
|
4.3
|
58.1
|
1.0
|
|
CG1
|
K:VAL81
|
4.4
|
58.1
|
1.0
|
|
CA
|
K:VAL81
|
4.5
|
58.1
|
1.0
|
|
N
|
K:CYS134
|
4.6
|
64.6
|
1.0
|
|
N
|
K:ARG142
|
4.6
|
61.4
|
1.0
|
|
O
|
K:PHE133
|
4.7
|
66.5
|
1.0
|
|
N
|
K:GLN143
|
4.7
|
58.7
|
1.0
|
|
C
|
K:CYS134
|
4.8
|
64.6
|
1.0
|
|
C
|
K:PHE133
|
4.9
|
66.5
|
1.0
|
|
C
|
K:CYS141
|
4.9
|
57.4
|
1.0
|
|
Zinc binding site 7 out
of 12 in 6z0v
Go back to
Zinc Binding Sites List in 6z0v
Zinc binding site 7 out
of 12 in the Cryoem Structure of the Chikungunya Virus NSP1 Complex
 Mono view
 Stereo pair view
|
|
A full contact list of Zinc with other atoms in the Zn binding
site number 7 of Cryoem Structure of the Chikungunya Virus NSP1 Complex within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
M:Zn1001
b:86.2
occ:1.00
|
OE2
|
M:GLU129
|
1.8
|
66.7
|
1.0
|
|
NE2
|
M:HIS79
|
2.0
|
61.3
|
1.0
|
|
SG
|
M:CYS141
|
2.4
|
58.8
|
1.0
|
|
SG
|
M:CYS134
|
2.4
|
66.1
|
1.0
|
|
CB
|
M:CYS134
|
2.4
|
66.1
|
1.0
|
|
CE1
|
M:HIS79
|
2.9
|
61.3
|
1.0
|
|
CD2
|
M:HIS79
|
3.0
|
61.3
|
1.0
|
|
CD
|
M:GLU129
|
3.0
|
66.7
|
1.0
|
|
CB
|
M:CYS141
|
3.4
|
58.8
|
1.0
|
|
CG2
|
M:VAL81
|
3.5
|
60.4
|
1.0
|
|
OE1
|
M:GLU129
|
3.6
|
66.7
|
1.0
|
|
CA
|
M:CYS134
|
3.9
|
66.1
|
1.0
|
|
ND1
|
M:HIS79
|
4.0
|
61.3
|
1.0
|
|
CG
|
M:HIS79
|
4.1
|
61.3
|
1.0
|
|
CB
|
M:GLN143
|
4.2
|
58.7
|
1.0
|
|
CG
|
M:GLU129
|
4.2
|
66.7
|
1.0
|
|
CA
|
M:CYS141
|
4.3
|
58.8
|
1.0
|
|
CB
|
M:VAL81
|
4.3
|
60.4
|
1.0
|
|
CG1
|
M:VAL81
|
4.4
|
60.4
|
1.0
|
|
CA
|
M:VAL81
|
4.5
|
60.4
|
1.0
|
|
N
|
M:ARG142
|
4.6
|
60.6
|
1.0
|
|
N
|
M:CYS134
|
4.6
|
66.1
|
1.0
|
|
N
|
M:GLN143
|
4.7
|
58.7
|
1.0
|
|
O
|
M:PHE133
|
4.7
|
67.8
|
1.0
|
|
C
|
M:CYS134
|
4.9
|
66.1
|
1.0
|
|
C
|
M:PHE133
|
4.9
|
67.8
|
1.0
|
|
C
|
M:CYS141
|
4.9
|
58.8
|
1.0
|
|
Zinc binding site 8 out
of 12 in 6z0v
Go back to
Zinc Binding Sites List in 6z0v
Zinc binding site 8 out
of 12 in the Cryoem Structure of the Chikungunya Virus NSP1 Complex
 Mono view
 Stereo pair view
|
|
A full contact list of Zinc with other atoms in the Zn binding
site number 8 of Cryoem Structure of the Chikungunya Virus NSP1 Complex within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
O:Zn1001
b:80.3
occ:1.00
|
OE2
|
O:GLU129
|
1.8
|
67.3
|
1.0
|
|
NE2
|
O:HIS79
|
2.0
|
58.7
|
1.0
|
|
SG
|
O:CYS141
|
2.4
|
55.0
|
1.0
|
|
SG
|
O:CYS134
|
2.4
|
63.9
|
1.0
|
|
CB
|
O:CYS134
|
2.4
|
63.9
|
1.0
|
|
CE1
|
O:HIS79
|
2.9
|
58.7
|
1.0
|
|
CD2
|
O:HIS79
|
2.9
|
58.7
|
1.0
|
|
CD
|
O:GLU129
|
3.0
|
67.3
|
1.0
|
|
CB
|
O:CYS141
|
3.4
|
55.0
|
1.0
|
|
CG2
|
O:VAL81
|
3.4
|
58.1
|
1.0
|
|
OE1
|
O:GLU129
|
3.6
|
67.3
|
1.0
|
|
CA
|
O:CYS134
|
3.9
|
63.9
|
1.0
|
|
ND1
|
O:HIS79
|
4.0
|
58.7
|
1.0
|
|
CG
|
O:HIS79
|
4.1
|
58.7
|
1.0
|
|
CB
|
O:GLN143
|
4.1
|
58.2
|
1.0
|
|
CG
|
O:GLU129
|
4.1
|
67.3
|
1.0
|
|
CA
|
O:CYS141
|
4.3
|
55.0
|
1.0
|
|
CB
|
O:VAL81
|
4.3
|
58.1
|
1.0
|
|
CG1
|
O:VAL81
|
4.4
|
58.1
|
1.0
|
|
CA
|
O:VAL81
|
4.5
|
58.1
|
1.0
|
|
N
|
O:ARG142
|
4.6
|
59.8
|
1.0
|
|
N
|
O:CYS134
|
4.6
|
63.9
|
1.0
|
|
N
|
O:GLN143
|
4.7
|
58.2
|
1.0
|
|
O
|
O:PHE133
|
4.7
|
66.3
|
1.0
|
|
C
|
O:CYS134
|
4.9
|
63.9
|
1.0
|
|
C
|
O:PHE133
|
4.9
|
66.3
|
1.0
|
|
C
|
O:CYS141
|
4.9
|
55.0
|
1.0
|
|
Zinc binding site 9 out
of 12 in 6z0v
Go back to
Zinc Binding Sites List in 6z0v
Zinc binding site 9 out
of 12 in the Cryoem Structure of the Chikungunya Virus NSP1 Complex
 Mono view
 Stereo pair view
|
|
A full contact list of Zinc with other atoms in the Zn binding
site number 9 of Cryoem Structure of the Chikungunya Virus NSP1 Complex within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
Q:Zn1001
b:78.3
occ:1.00
|
OE2
|
Q:GLU129
|
1.8
|
67.6
|
1.0
|
|
NE2
|
Q:HIS79
|
1.9
|
58.1
|
1.0
|
|
SG
|
Q:CYS141
|
2.4
|
56.9
|
1.0
|
|
CB
|
Q:CYS134
|
2.4
|
64.9
|
1.0
|
|
SG
|
Q:CYS134
|
2.4
|
64.9
|
1.0
|
|
CE1
|
Q:HIS79
|
2.9
|
58.1
|
1.0
|
|
CD2
|
Q:HIS79
|
3.0
|
58.1
|
1.0
|
|
CD
|
Q:GLU129
|
3.0
|
67.6
|
1.0
|
|
CB
|
Q:CYS141
|
3.4
|
56.9
|
1.0
|
|
CG2
|
Q:VAL81
|
3.5
|
57.7
|
1.0
|
|
OE1
|
Q:GLU129
|
3.6
|
67.6
|
1.0
|
|
CA
|
Q:CYS134
|
3.9
|
64.9
|
1.0
|
|
ND1
|
Q:HIS79
|
4.0
|
58.1
|
1.0
|
|
CG
|
Q:HIS79
|
4.1
|
58.1
|
1.0
|
|
CB
|
Q:GLN143
|
4.1
|
58.5
|
1.0
|
|
CG
|
Q:GLU129
|
4.2
|
67.6
|
1.0
|
|
CA
|
Q:CYS141
|
4.3
|
56.9
|
1.0
|
|
CB
|
Q:VAL81
|
4.3
|
57.7
|
1.0
|
|
CG1
|
Q:VAL81
|
4.4
|
57.7
|
1.0
|
|
CA
|
Q:VAL81
|
4.5
|
57.7
|
1.0
|
|
N
|
Q:CYS134
|
4.6
|
64.9
|
1.0
|
|
N
|
Q:ARG142
|
4.6
|
60.8
|
1.0
|
|
O
|
Q:PHE133
|
4.7
|
66.8
|
1.0
|
|
N
|
Q:GLN143
|
4.7
|
58.5
|
1.0
|
|
C
|
Q:CYS134
|
4.8
|
64.9
|
1.0
|
|
C
|
Q:PHE133
|
4.9
|
66.8
|
1.0
|
|
C
|
Q:CYS141
|
4.9
|
56.9
|
1.0
|
|
Zinc binding site 10 out
of 12 in 6z0v
Go back to
Zinc Binding Sites List in 6z0v
Zinc binding site 10 out
of 12 in the Cryoem Structure of the Chikungunya Virus NSP1 Complex
 Mono view
 Stereo pair view
|
|
A full contact list of Zinc with other atoms in the Zn binding
site number 10 of Cryoem Structure of the Chikungunya Virus NSP1 Complex within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
S:Zn1001
b:86.4
occ:1.00
|
OE2
|
S:GLU129
|
1.8
|
66.8
|
1.0
|
|
NE2
|
S:HIS79
|
2.0
|
61.2
|
1.0
|
|
SG
|
S:CYS141
|
2.4
|
58.8
|
1.0
|
|
SG
|
S:CYS134
|
2.4
|
66.0
|
1.0
|
|
CB
|
S:CYS134
|
2.4
|
66.0
|
1.0
|
|
CE1
|
S:HIS79
|
2.9
|
61.2
|
1.0
|
|
CD2
|
S:HIS79
|
3.0
|
61.2
|
1.0
|
|
CD
|
S:GLU129
|
3.0
|
66.8
|
1.0
|
|
CB
|
S:CYS141
|
3.4
|
58.8
|
1.0
|
|
CG2
|
S:VAL81
|
3.5
|
60.3
|
1.0
|
|
OE1
|
S:GLU129
|
3.6
|
66.8
|
1.0
|
|
CA
|
S:CYS134
|
3.9
|
66.0
|
1.0
|
|
ND1
|
S:HIS79
|
4.0
|
61.2
|
1.0
|
|
CG
|
S:HIS79
|
4.1
|
61.2
|
1.0
|
|
CB
|
S:GLN143
|
4.2
|
58.9
|
1.0
|
|
CG
|
S:GLU129
|
4.2
|
66.8
|
1.0
|
|
CA
|
S:CYS141
|
4.3
|
58.8
|
1.0
|
|
CB
|
S:VAL81
|
4.3
|
60.3
|
1.0
|
|
CG1
|
S:VAL81
|
4.4
|
60.3
|
1.0
|
|
CA
|
S:VAL81
|
4.5
|
60.3
|
1.0
|
|
N
|
S:ARG142
|
4.6
|
60.9
|
1.0
|
|
N
|
S:CYS134
|
4.6
|
66.0
|
1.0
|
|
N
|
S:GLN143
|
4.7
|
58.9
|
1.0
|
|
O
|
S:PHE133
|
4.7
|
67.7
|
1.0
|
|
C
|
S:CYS134
|
4.9
|
66.0
|
1.0
|
|
C
|
S:PHE133
|
4.9
|
67.7
|
1.0
|
|
C
|
S:CYS141
|
4.9
|
58.8
|
1.0
|
|
Reference:
R.Jones,
G.Bragagnolo,
R.Arranz,
J.Reguera.
Alphavirus NSP1 Capping Pores Gate Membranous Viral Replication Factories Nature 2020.
ISSN: ESSN 1476-4687
Page generated: Thu Aug 21 21:36:29 2025
|
