Atomistry » Zinc » PDB 6yo4-6yzo » 6yx9
Atomistry »
  Zinc »
    PDB 6yo4-6yzo »
      6yx9 »

Zinc in PDB 6yx9: Cryogenic Human Adiponectin Receptor 2 (ADIPOR2) at 2.4 A Resolution Determined By Serial Crystallography (Ssx) Using Crystaldirect

Protein crystallography data

The structure of Cryogenic Human Adiponectin Receptor 2 (ADIPOR2) at 2.4 A Resolution Determined By Serial Crystallography (Ssx) Using Crystaldirect, PDB code: 6yx9 was solved by R.D.Healey, S.Basu, A.S.Humm, C.Leyrat, F.Dupeux, A.Pica, S.Granier, J.A.Marquez, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 22.00 / 2.40
Space group P 21 2 21
Cell size a, b, c (Å), α, β, γ (°) 74.72, 100.58, 109.69, 90, 90, 90
R / Rfree (%) 20.7 / 24.8

Zinc Binding Sites:

The binding sites of Zinc atom in the Cryogenic Human Adiponectin Receptor 2 (ADIPOR2) at 2.4 A Resolution Determined By Serial Crystallography (Ssx) Using Crystaldirect (pdb code 6yx9). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Cryogenic Human Adiponectin Receptor 2 (ADIPOR2) at 2.4 A Resolution Determined By Serial Crystallography (Ssx) Using Crystaldirect, PDB code: 6yx9:

Zinc binding site 1 out of 1 in 6yx9

Go back to Zinc Binding Sites List in 6yx9
Zinc binding site 1 out of 1 in the Cryogenic Human Adiponectin Receptor 2 (ADIPOR2) at 2.4 A Resolution Determined By Serial Crystallography (Ssx) Using Crystaldirect


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Cryogenic Human Adiponectin Receptor 2 (ADIPOR2) at 2.4 A Resolution Determined By Serial Crystallography (Ssx) Using Crystaldirect within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn401

b:72.3
occ:1.00
NE2 A:HIS348 2.1 64.3 1.0
NE2 A:HIS352 2.2 63.0 1.0
NE2 A:HIS202 2.3 66.4 1.0
O1 A:OLA407 2.6 81.8 1.0
CE1 A:HIS348 3.1 64.7 1.0
CD2 A:HIS352 3.1 62.3 1.0
CE1 A:HIS202 3.1 67.1 1.0
CD2 A:HIS348 3.2 62.7 1.0
CE1 A:HIS352 3.2 63.7 1.0
CD2 A:HIS202 3.4 65.8 1.0
C1 A:OLA407 3.4 81.7 1.0
O2 A:OLA407 3.6 82.1 1.0
OD2 A:ASP219 3.7 77.2 1.0
OG A:SER198 3.9 71.0 1.0
OD1 A:ASP219 4.1 73.3 1.0
ND1 A:HIS348 4.2 64.4 1.0
CG A:HIS352 4.3 62.6 1.0
CG A:HIS348 4.3 62.8 1.0
ND1 A:HIS352 4.3 64.0 1.0
ND1 A:HIS202 4.3 67.5 1.0
CG A:ASP219 4.4 73.8 1.0
CG A:HIS202 4.4 65.8 1.0
C2 A:OLA407 4.7 80.6 1.0

Reference:

R.D.Healey, S.Basu, A.S.Humm, C.Leyrat, F.Dupeux, A.Pica, S.Granier, J.A.Marquez. Rapid, Automated Serial Crystallography Analysis of Membrane Proteins Through Crystaldirect To Be Published.
Page generated: Tue Oct 29 15:16:02 2024

Last articles

Fe in 2YXO
Fe in 2YRS
Fe in 2YXC
Fe in 2YNM
Fe in 2YVJ
Fe in 2YP1
Fe in 2YU2
Fe in 2YU1
Fe in 2YQB
Fe in 2YOO
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy