Atomistry » Zinc » PDB 6y8p-6yhc » 6yh7
Atomistry »
  Zinc »
    PDB 6y8p-6yhc »
      6yh7 »

Zinc in PDB 6yh7: Crystal Structure of Chimeric Carbonic Anhydrase XII with 3-[(1S)-2,3- Dihydro-1H-Inden-1-Ylamino]-2,5,6-Trifluoro-4-[(2-Hydroxyethyl) Sulfonyl]Benzenesulfonamide

Enzymatic activity of Crystal Structure of Chimeric Carbonic Anhydrase XII with 3-[(1S)-2,3- Dihydro-1H-Inden-1-Ylamino]-2,5,6-Trifluoro-4-[(2-Hydroxyethyl) Sulfonyl]Benzenesulfonamide

All present enzymatic activity of Crystal Structure of Chimeric Carbonic Anhydrase XII with 3-[(1S)-2,3- Dihydro-1H-Inden-1-Ylamino]-2,5,6-Trifluoro-4-[(2-Hydroxyethyl) Sulfonyl]Benzenesulfonamide:
4.2.1.1;

Protein crystallography data

The structure of Crystal Structure of Chimeric Carbonic Anhydrase XII with 3-[(1S)-2,3- Dihydro-1H-Inden-1-Ylamino]-2,5,6-Trifluoro-4-[(2-Hydroxyethyl) Sulfonyl]Benzenesulfonamide, PDB code: 6yh7 was solved by A.Smirnov, E.Manakova, S.Grazulis, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 40.62 / 1.12
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 41.786, 40.969, 71.267, 90, 103.57, 90
R / Rfree (%) 13.3 / 16.3

Other elements in 6yh7:

The structure of Crystal Structure of Chimeric Carbonic Anhydrase XII with 3-[(1S)-2,3- Dihydro-1H-Inden-1-Ylamino]-2,5,6-Trifluoro-4-[(2-Hydroxyethyl) Sulfonyl]Benzenesulfonamide also contains other interesting chemical elements:

Fluorine (F) 6 atoms

Zinc Binding Sites:

The binding sites of Zinc atom in the Crystal Structure of Chimeric Carbonic Anhydrase XII with 3-[(1S)-2,3- Dihydro-1H-Inden-1-Ylamino]-2,5,6-Trifluoro-4-[(2-Hydroxyethyl) Sulfonyl]Benzenesulfonamide (pdb code 6yh7). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of Chimeric Carbonic Anhydrase XII with 3-[(1S)-2,3- Dihydro-1H-Inden-1-Ylamino]-2,5,6-Trifluoro-4-[(2-Hydroxyethyl) Sulfonyl]Benzenesulfonamide, PDB code: 6yh7:

Zinc binding site 1 out of 1 in 6yh7

Go back to Zinc Binding Sites List in 6yh7
Zinc binding site 1 out of 1 in the Crystal Structure of Chimeric Carbonic Anhydrase XII with 3-[(1S)-2,3- Dihydro-1H-Inden-1-Ylamino]-2,5,6-Trifluoro-4-[(2-Hydroxyethyl) Sulfonyl]Benzenesulfonamide


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of Chimeric Carbonic Anhydrase XII with 3-[(1S)-2,3- Dihydro-1H-Inden-1-Ylamino]-2,5,6-Trifluoro-4-[(2-Hydroxyethyl) Sulfonyl]Benzenesulfonamide within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn301

b:8.1
occ:1.00
 N4 A:5EF303 2.0 9.3 1.0
NE2 A:HIS96 2.0 8.6 1.0
NE2 A:HIS94 2.0 8.1 1.0
ND1 A:HIS119 2.0 8.3 1.0
CE1 A:HIS119 2.9 8.5 1.0
F11 A:5EF303 2.9 12.9 1.0
CD2 A:HIS94 3.0 8.5 1.0
CD2 A:HIS96 3.0 8.9 1.0
CE1 A:HIS96 3.1 8.7 1.0
S1 A:5EF303 3.1 10.1 1.0
CE1 A:HIS94 3.1 8.6 1.0
CG A:HIS119 3.1 7.8 1.0
O3 A:5EF303 3.3 10.4 1.0
CB A:HIS119 3.5 8.4 1.0
C6 A:5EF303 3.6 12.2 1.0
C5 A:5EF303 3.7 10.9 1.0
OE1 A:GLU106 3.8 9.8 1.0
OG1 A:THR199 3.9 8.3 1.0
NE2 A:HIS119 4.1 8.5 1.0
CG A:HIS96 4.2 8.7 1.0
ND1 A:HIS96 4.2 9.4 1.0
ND1 A:HIS94 4.2 9.0 1.0
CG A:HIS94 4.2 8.6 1.0
CD2 A:HIS119 4.2 8.6 1.0
O2 A:5EF303 4.3 11.3 1.0
CD A:GLU106 4.8 8.7 1.0
C7 A:5EF303 4.8 14.3 1.0
C10 A:5EF303 5.0 12.4 1.0

Reference:

A.Smirnov, E.Manakova, S.Grazulis. Crystal Structure of Chimeric Carbonic Anhydrase XII with 3-[(1S)-2,3-Dihydro-1H-Inden-1-Ylamino]-2,5, 6-Trifluoro-4-[(2-Hydroxyethyl)Sulfonyl]Benzenesulfonamide To Be Published.
Page generated: Tue Oct 29 11:34:07 2024

Last articles

Mg in 9DVA
Mg in 9DW7
Mg in 9DW5
Mg in 9DUV
Mg in 9DUU
Mg in 9DUF
Mg in 9DUD
Mg in 9DU8
Mg in 9DU9
Mg in 9DSZ
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy