Zinc in PDB 6ybw: Structure of A Human 48S Translational Initiation Complex - 40S Body

The structure of Structure of A Human 48S Translational Initiation Complex - 40S Body also contains other interesting chemical elements:

Magnesium

(Mg)

60 atoms

The binding sites of Zinc atom in the Structure of A Human 48S Translational Initiation Complex - 40S Body (pdb code 6ybw). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Structure of A Human 48S Translational Initiation Complex - 40S Body, PDB code: 6ybw:

Zinc binding site 1 out of 1 in the Structure of A Human 48S Translational Initiation Complex - 40S Body


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Structure of A Human 48S Translational Initiation Complex - 40S Body within 5.0Å range: probe atom residue distance (Å) B Occ Q:Zn201 b:76.1 occ:1.00 SG Q:CYS26 2.5 55.7 1.0 SG Q:CYS77 2.5 53.9 1.0 CB Q:CYS77 2.8 53.9 1.0 CB Q:CYS74 2.8 53.4 1.0 SG Q:CYS23 3.2 55.1 1.0 N Q:CYS77 3.4 53.9 1.0 N Q:CYS74 3.6 53.4 1.0 CA Q:CYS77 3.7 53.9 1.0 CA Q:CYS74 3.7 53.4 1.0 CB Q:CYS26 4.0 55.7 1.0 CB Q:CYS23 4.1 55.1 1.0 SG Q:CYS74 4.1 53.4 1.0 C Q:CYS74 4.2 53.4 1.0 O Q:CYS74 4.3 53.4 1.0 C Q:SER76 4.5 50.2 1.0 N Q:CYS26 4.5 55.7 1.0 CB Q:SER76 4.7 50.2 1.0 CB Q:ASN25 4.7 56.2 1.0 C Q:CYS77 4.8 53.9 1.0 C Q:TYR73 4.8 52.3 1.0 N Q:SER76 4.9 50.2 1.0 CA Q:CYS26 4.9 55.7 1.0 CA Q:SER76 4.9 50.2 1.0 CB Q:ARG28 5.0 51.2 1.0

J.Brito Querido, M.Sokabe, S.Kraatz, Y.Gordiyenko, J.M.Skehel, C.S.Fraser, V.Ramakrishnan. Structure of A Human 48STRANSLATIONAL Initiation Complex. Science V. 369 1220 2020.
ISSN: ESSN 1095-9203
PubMed: 32883864
DOI: 10.1126/SCIENCE.ABA4904