Zinc in PDB 6y8p: Crystal Structure of Snap-Tag Labeled with A Benzyl- Tetramethylrhodamine Fluorophore

The structure of Crystal Structure of Snap-Tag Labeled with A Benzyl- Tetramethylrhodamine Fluorophore, PDB code: 6y8p was solved by G.Gotthard, T.Tanzer, K.Johnsson, J.Hiblot, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	48.98 / 2.30
Space group	P 32 2 1
Cell size a, b, c (Å), α, β, γ (°)	65.515, 65.515, 97.067, 90, 90, 120
R / Rfree (%)	23.6 / 27.7

The binding sites of Zinc atom in the Crystal Structure of Snap-Tag Labeled with A Benzyl- Tetramethylrhodamine Fluorophore (pdb code 6y8p). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of Snap-Tag Labeled with A Benzyl- Tetramethylrhodamine Fluorophore, PDB code: 6y8p:

Zinc binding site 1 out of 1 in the Crystal Structure of Snap-Tag Labeled with A Benzyl- Tetramethylrhodamine Fluorophore


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of Snap-Tag Labeled with A Benzyl- Tetramethylrhodamine Fluorophore within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn201 b:84.2 occ:1.00 ND1 A:HIS85 2.1 83.6 1.0 NE2 A:HIS29 2.2 77.6 1.0 SG A:CYS5 2.5 106.7 1.0 SG A:CYS24 2.5 84.8 1.0 CE1 A:HIS85 3.0 86.5 1.0 CE1 A:HIS29 3.1 76.7 1.0 CG A:HIS85 3.2 81.2 1.0 CD2 A:HIS29 3.2 74.6 1.0 CB A:CYS24 3.3 84.7 1.0 CB A:CYS5 3.3 106.4 1.0 O A:HIS85 3.5 71.0 1.0 CB A:HIS85 3.6 75.3 1.0 O A:HOH310 4.1 77.2 1.0 NE2 A:HIS85 4.2 85.9 1.0 ND1 A:HIS29 4.2 73.8 1.0 CD2 A:HIS85 4.3 83.1 1.0 CG A:HIS29 4.3 73.1 1.0 C A:HIS85 4.4 69.2 1.0 O A:GLY27 4.5 82.3 1.0 CA A:CYS24 4.5 83.9 1.0 N A:CYS24 4.6 81.6 1.0 CA A:HIS85 4.6 71.8 1.0 CA A:CYS5 4.7 110.4 1.0 SD A:MET7 4.9 101.5 1.0 OE1 A:GLN26 4.9 102.2 1.0 CB A:GLN26 4.9 94.1 1.0 O A:HOH322 4.9 86.6 1.0 CG A:MET7 4.9 102.7 1.0 OE1 A:GLN90 5.0 88.6 1.0

G.Gotthard, T.Tanzer, K.Johnsson, J.Hiblot. Crystal Structure of Snap-Tag Labeled with Benzyl-Tetramethylrhodamine To Be Published.