Atomistry » Zinc » PDB 6xuq-6y8n » 6xze
Atomistry »
  Zinc »
    PDB 6xuq-6y8n »
      6xze »

Zinc in PDB 6xze: Crystal Structure of Human Carbonic Anhydrase I in Complex with 4-(3- (2-((2-Fluorobenzyl)Amino)Ethyl)Ureido) Benzenesulfonamide

Enzymatic activity of Crystal Structure of Human Carbonic Anhydrase I in Complex with 4-(3- (2-((2-Fluorobenzyl)Amino)Ethyl)Ureido) Benzenesulfonamide

All present enzymatic activity of Crystal Structure of Human Carbonic Anhydrase I in Complex with 4-(3- (2-((2-Fluorobenzyl)Amino)Ethyl)Ureido) Benzenesulfonamide:
4.2.1.1;

Protein crystallography data

The structure of Crystal Structure of Human Carbonic Anhydrase I in Complex with 4-(3- (2-((2-Fluorobenzyl)Amino)Ethyl)Ureido) Benzenesulfonamide, PDB code: 6xze was solved by G.Zanotti, A.Majid, M.Bozdag, A.Angeli, F.Carta, P.Berto, C.Supuran, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 55.67 / 1.54
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 62.601, 71.645, 121.690, 90.00, 90.00, 90.00
R / Rfree (%) 19 / 21.4

Other elements in 6xze:

The structure of Crystal Structure of Human Carbonic Anhydrase I in Complex with 4-(3- (2-((2-Fluorobenzyl)Amino)Ethyl)Ureido) Benzenesulfonamide also contains other interesting chemical elements:

Fluorine (F) 2 atoms

Zinc Binding Sites:

The binding sites of Zinc atom in the Crystal Structure of Human Carbonic Anhydrase I in Complex with 4-(3- (2-((2-Fluorobenzyl)Amino)Ethyl)Ureido) Benzenesulfonamide (pdb code 6xze). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Crystal Structure of Human Carbonic Anhydrase I in Complex with 4-(3- (2-((2-Fluorobenzyl)Amino)Ethyl)Ureido) Benzenesulfonamide, PDB code: 6xze:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 6xze

Go back to Zinc Binding Sites List in 6xze
Zinc binding site 1 out of 2 in the Crystal Structure of Human Carbonic Anhydrase I in Complex with 4-(3- (2-((2-Fluorobenzyl)Amino)Ethyl)Ureido) Benzenesulfonamide


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of Human Carbonic Anhydrase I in Complex with 4-(3- (2-((2-Fluorobenzyl)Amino)Ethyl)Ureido) Benzenesulfonamide within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn301

b:19.5
occ:1.00
 N01 A:O4Z302 2.0 17.8 1.0
NE2 A:HIS94 2.0 19.8 1.0
NE2 A:HIS96 2.0 17.6 1.0
ND1 A:HIS119 2.1 19.0 1.0
CE1 A:HIS119 2.9 19.0 1.0
CD2 A:HIS96 3.0 19.6 1.0
CD2 A:HIS94 3.0 18.7 1.0
CE1 A:HIS94 3.0 22.0 1.0
S02 A:O4Z302 3.1 21.3 1.0
CE1 A:HIS96 3.1 20.9 1.0
O04 A:O4Z302 3.1 23.1 1.0
CG A:HIS119 3.2 17.1 1.0
CB A:HIS119 3.6 19.1 1.0
OG1 A:THR199 4.0 20.3 1.0
NE2 A:HIS119 4.1 19.8 1.0
OE2 A:GLU106 4.1 20.8 1.0
ND1 A:HIS94 4.1 21.4 1.0
CG A:HIS94 4.1 20.3 1.0
CG A:HIS96 4.2 18.6 1.0
ND1 A:HIS96 4.2 20.7 1.0
C05 A:O4Z302 4.2 22.9 1.0
CD2 A:HIS119 4.2 17.6 1.0
O03 A:O4Z302 4.3 23.5 1.0
O A:HOH500 4.5 24.1 1.0
O A:HOH468 4.6 20.1 1.0
C06 A:O4Z302 4.8 27.3 1.0
C10 A:O4Z302 5.0 27.8 1.0

Zinc binding site 2 out of 2 in 6xze

Go back to Zinc Binding Sites List in 6xze
Zinc binding site 2 out of 2 in the Crystal Structure of Human Carbonic Anhydrase I in Complex with 4-(3- (2-((2-Fluorobenzyl)Amino)Ethyl)Ureido) Benzenesulfonamide


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Crystal Structure of Human Carbonic Anhydrase I in Complex with 4-(3- (2-((2-Fluorobenzyl)Amino)Ethyl)Ureido) Benzenesulfonamide within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Zn301

b:20.0
occ:1.00
 N01 B:O4Z302 1.9 18.8 1.0
NE2 B:HIS94 2.0 18.7 1.0
ND1 B:HIS119 2.1 20.4 1.0
NE2 B:HIS96 2.1 17.2 1.0
CE1 B:HIS119 2.9 17.0 1.0
CE1 B:HIS94 3.0 22.9 1.0
CD2 B:HIS96 3.0 20.6 1.0
CD2 B:HIS94 3.0 18.5 1.0
S02 B:O4Z302 3.1 20.9 1.0
CE1 B:HIS96 3.1 18.3 1.0
CG B:HIS119 3.2 19.2 1.0
O04 B:O4Z302 3.2 22.3 1.0
CB B:HIS119 3.7 18.9 1.0
OG1 B:THR199 3.9 20.0 1.0
C05 B:O4Z302 4.0 22.4 1.0
OE2 B:GLU106 4.0 20.3 1.0
NE2 B:HIS119 4.1 21.3 1.0
ND1 B:HIS94 4.1 23.2 1.0
CG B:HIS94 4.1 21.3 1.0
CG B:HIS96 4.2 18.7 1.0
ND1 B:HIS96 4.2 19.3 1.0
CD2 B:HIS119 4.2 20.9 1.0
O03 B:O4Z302 4.3 21.7 1.0
C06 B:O4Z302 4.4 32.0 1.0
O B:HOH461 4.6 20.6 1.0
O B:HOH453 4.6 23.4 1.0
C10 B:O4Z302 4.8 26.6 1.0

Reference:

M.Ali, M.Bozdag, U.Farooq, A.Angeli, F.Carta, P.Berto, G.Zanotti, C.T.Supuran. Benzylaminoethyureido-Tailed Benzenesulfonamides: Design, Synthesis, Kinetic and X-Ray Investigations on Human Carbonic Anhydrases. Int J Mol Sci V. 21 2020.
ISSN: ESSN 1422-0067
PubMed: 32272689
DOI: 10.3390/IJMS21072560
Page generated: Tue Oct 29 11:17:41 2024

Last articles

Zn in 9MJ5
Zn in 9HNW
Zn in 9G0L
Zn in 9FNE
Zn in 9DZN
Zn in 9E0I
Zn in 9D32
Zn in 9DAK
Zn in 8ZXC
Zn in 8ZUF
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy