Zinc in PDB 6x38: Crystal Structure of the FN5 Domain of Drosophila Lar

All present enzymatic activity of Crystal Structure of the FN5 Domain of Drosophila Lar:
3.1.3.48;

The structure of Crystal Structure of the FN5 Domain of Drosophila Lar, PDB code: 6x38 was solved by S.Bouyain, J.E.Kawakami, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	32.81 / 1.30
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	40.58, 42.658, 51.347, 90, 90, 90
R / Rfree (%)	16.7 / 18.2

The binding sites of Zinc atom in the Crystal Structure of the FN5 Domain of Drosophila Lar (pdb code 6x38). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Crystal Structure of the FN5 Domain of Drosophila Lar, PDB code: 6x38:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the Crystal Structure of the FN5 Domain of Drosophila Lar


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of the FN5 Domain of Drosophila Lar within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn901 b:9.7 occ:0.77 OD2 A:ASP796 1.9 14.4 1.0 ND1 A:HIS745 2.0 8.6 1.0 NE2 A:HIS747 2.0 12.7 1.0 O A:HOH1087 2.0 13.9 0.9 CG A:ASP796 2.7 14.6 1.0 OD1 A:ASP796 2.7 16.8 1.0 CE1 A:HIS747 2.8 13.4 1.0 HE1 A:HIS747 2.9 16.1 1.0 CE1 A:HIS745 3.0 7.9 1.0 CG A:HIS745 3.0 7.4 1.0 HB2 A:HIS745 3.1 9.3 1.0 HE1 A:HIS745 3.1 9.4 1.0 CD2 A:HIS747 3.2 12.8 1.0 HB3 A:HIS745 3.2 9.3 1.0 CB A:HIS745 3.3 7.7 1.0 HD2 A:HIS747 3.4 15.4 1.0 HG3 A:LYS764 3.8 17.1 1.0 O A:HOH1007 4.0 18.5 1.0 ND1 A:HIS747 4.0 12.7 1.0 NE2 A:HIS745 4.1 8.3 1.0 CB A:ASP796 4.1 16.3 1.0 CD2 A:HIS745 4.1 8.0 1.0 CG A:HIS747 4.2 11.1 1.0 HG2 A:LYS764 4.3 17.1 1.0 HB2 A:ASP796 4.4 19.5 1.0 HD21 A:LEU791 4.4 19.8 1.0 HB3 A:ASP796 4.4 19.5 1.0 HB3 A:ALA789 4.4 11.5 1.0 HH21 A:ARG799 4.5 17.1 1.0 CG A:LYS764 4.5 14.3 1.0 HD23 A:LEU791 4.6 19.8 1.0 HD1 A:HIS747 4.8 15.2 1.0 CA A:HIS745 4.8 6.8 1.0 HD3 A:LYS764 4.8 19.1 1.0 HE2 A:LYS764 4.9 19.9 1.0 CD2 A:LEU791 4.9 16.5 1.0 HD2 A:HIS745 5.0 9.7 1.0 O A:HOH1068 5.0 18.1 1.0

Zinc binding site 2 out of 2 in the Crystal Structure of the FN5 Domain of Drosophila Lar


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Crystal Structure of the FN5 Domain of Drosophila Lar within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn902 b:8.3 occ:1.00 OD1 A:ASP766 2.0 10.9 1.0 NE2 A:HIS745 2.0 8.3 1.0 CG A:ASP766 2.9 11.0 1.0 CD2 A:HIS745 3.0 8.0 1.0 CE1 A:HIS745 3.0 7.9 1.0 OD2 A:ASP766 3.0 15.1 1.0 HD2 A:HIS745 3.2 9.7 1.0 HE1 A:HIS745 3.2 9.4 1.0 HZ3 A:LYS764 3.3 24.9 1.0 HE2 A:LYS764 3.6 19.9 1.0 HD11 A:LEU791 3.6 15.0 1.0 HD3 A:LYS764 3.7 19.1 1.0 HD13 A:LEU791 3.9 15.0 1.0 HD21 A:LEU791 4.0 19.8 1.0 NZ A:LYS764 4.0 20.7 1.0 ND1 A:HIS745 4.1 8.6 1.0 CG A:HIS745 4.1 7.4 1.0 CE A:LYS764 4.2 16.6 1.0 CB A:ASP766 4.2 10.4 1.0 CD1 A:LEU791 4.2 12.5 1.0 HZ1 A:LYS764 4.2 24.9 1.0 O A:HOH1060 4.4 17.6 1.0 HA A:ASP766 4.4 11.9 1.0 CD A:LYS764 4.4 15.9 1.0 HB3 A:ASP766 4.4 12.4 1.0 HD22 A:LEU791 4.6 19.8 1.0 CD2 A:LEU791 4.7 16.5 1.0 HZ2 A:LYS764 4.8 24.9 1.0 HB2 A:ASP766 4.8 12.4 1.0 CA A:ASP766 4.9 9.9 1.0 HD12 A:LEU791 4.9 15.0 1.0 HD2 A:LYS764 4.9 19.1 1.0

S.Bouyain, J.E.Kawakami. Complex Genetic Drosophila Lar-Integrin Interactions Mediate Actin Patterning in Muscle Tissue To Be Published.