Atomistry » Zinc » PDB 6st5-6t6l » 6swm
Atomistry »
  Zinc »
    PDB 6st5-6t6l »
      6swm »

Zinc in PDB 6swm: Selenol Bound Carbonic Anhydrase I

Enzymatic activity of Selenol Bound Carbonic Anhydrase I

All present enzymatic activity of Selenol Bound Carbonic Anhydrase I:
4.2.1.1;

Protein crystallography data

The structure of Selenol Bound Carbonic Anhydrase I, PDB code: 6swm was solved by A.Angeli, M.Ferraroni, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 46.66 / 2.77
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 62.789, 69.586, 119.191, 90.00, 90.00, 90.00
R / Rfree (%) 27.2 / 33

Zinc Binding Sites:

The binding sites of Zinc atom in the Selenol Bound Carbonic Anhydrase I (pdb code 6swm). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Selenol Bound Carbonic Anhydrase I, PDB code: 6swm:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 6swm

Go back to Zinc Binding Sites List in 6swm
Zinc binding site 1 out of 2 in the Selenol Bound Carbonic Anhydrase I


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Selenol Bound Carbonic Anhydrase I within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn301

b:36.7
occ:1.00
NE2 A:HIS96 1.9 25.6 1.0
NE2 A:HIS94 2.0 38.0 1.0
ND1 A:HIS119 2.2 37.4 1.0
SE A:LVW302 2.6 22.8 1.0
CE1 A:HIS96 2.8 24.7 1.0
CE1 A:HIS94 2.9 37.6 1.0
CE1 A:HIS119 3.0 38.9 1.0
CD2 A:HIS96 3.0 25.4 1.0
C1 A:LVW302 3.0 13.2 1.0
CD2 A:HIS94 3.0 37.0 1.0
CG A:HIS119 3.3 35.8 1.0
OG1 A:THR199 3.6 36.8 1.0
CB A:HIS119 3.7 34.6 1.0
ND1 A:HIS96 3.9 26.2 1.0
ND1 A:HIS94 4.0 36.1 1.0
CG A:HIS96 4.1 26.6 1.0
CG A:HIS94 4.1 35.0 1.0
NE2 A:HIS119 4.2 38.6 1.0
CD2 A:HIS119 4.3 36.4 1.0
OE2 A:GLU106 4.3 38.2 1.0
C A:LVW302 4.3 11.1 1.0
O A:LVW302 4.4 10.3 1.0
ND1 A:HIS200 4.9 43.8 1.0
CE1 A:HIS200 5.0 43.4 1.0

Zinc binding site 2 out of 2 in 6swm

Go back to Zinc Binding Sites List in 6swm
Zinc binding site 2 out of 2 in the Selenol Bound Carbonic Anhydrase I


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Selenol Bound Carbonic Anhydrase I within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Zn301

b:28.7
occ:1.00
NE2 B:HIS94 1.9 26.5 1.0
ND1 B:HIS119 2.0 36.6 1.0
NE2 B:HIS96 2.1 31.0 1.0
SE B:LVW302 2.3 34.9 1.0
CE1 B:HIS94 2.8 28.1 1.0
CE1 B:HIS119 2.9 39.1 1.0
CD2 B:HIS94 2.9 27.7 1.0
CD2 B:HIS96 3.0 31.1 1.0
CG B:HIS119 3.1 34.4 1.0
CE1 B:HIS96 3.1 32.3 1.0
C1 B:LVW302 3.2 17.9 1.0
CB B:HIS119 3.5 30.5 1.0
OG1 B:THR199 3.7 50.5 1.0
ND1 B:HIS94 4.0 29.4 1.0
CG B:HIS94 4.0 28.4 1.0
NE2 B:HIS119 4.1 40.8 1.0
CG B:HIS96 4.1 32.3 1.0
OE2 B:GLU106 4.2 31.4 1.0
CD2 B:HIS119 4.2 38.1 1.0
ND1 B:HIS96 4.2 32.6 1.0
C B:LVW302 4.5 14.3 1.0
CH2 B:TRP209 4.9 32.0 1.0

Reference:

A.Angeli, M.Ferraroni. Selenol Bound Carbonic Anhydrase I To Be Published.
Page generated: Tue Oct 29 07:43:31 2024

Last articles

Zn in 9MJ5
Zn in 9HNW
Zn in 9G0L
Zn in 9FNE
Zn in 9DZN
Zn in 9E0I
Zn in 9D32
Zn in 9DAK
Zn in 8ZXC
Zn in 8ZUF
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy