Zinc in PDB 6st5: Crystal Structure of LICM2

The structure of Crystal Structure of LICM2, PDB code: 6st5 was solved by M.Gonsior, A.Mainz, M.Hugelland, A.Kuthning, M.Tietzmann, H.Dobbek, B.M.Martins, R.Sussmuth, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	47.50 / 2.82
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	78.365, 128.408, 141.22, 90, 90, 90
R / Rfree (%)	22.4 / 27.2

The structure of Crystal Structure of LICM2 also contains other interesting chemical elements:

Magnesium

(Mg)

1 atom

The binding sites of Zinc atom in the Crystal Structure of LICM2 (pdb code 6st5). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of LICM2, PDB code: 6st5:

Zinc binding site 1 out of 1 in the Crystal Structure of LICM2


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of LICM2 within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn1101 b:79.7 occ:1.00 HD1 A:HIS891 1.5 120.8 1.0 HB2 A:CYS899 1.8 80.1 1.0 ND1 A:HIS946 2.0 84.6 1.0 ND1 A:HIS891 2.3 100.7 1.0 CB A:CYS899 2.4 66.8 1.0 SG A:CYS945 2.5 72.7 1.0 SG A:CYS899 2.6 116.8 1.0 HB3 A:CYS899 2.6 80.1 1.0 HB2 A:HIS891 2.7 139.2 1.0 HB3 A:HIS946 2.8 85.8 1.0 HB3 A:CYS945 2.8 71.9 1.0 CG A:HIS946 3.0 89.5 1.0 CE1 A:HIS946 3.0 105.6 1.0 CG A:HIS891 3.0 106.7 1.0 CB A:CYS945 3.1 59.9 1.0 HB3 A:HIS891 3.1 139.2 1.0 CB A:HIS891 3.1 116.0 1.0 HE1 A:HIS946 3.2 126.7 1.0 C A:CYS945 3.3 81.4 1.0 CB A:HIS946 3.3 71.5 1.0 CE1 A:HIS891 3.4 106.6 1.0 N A:HIS946 3.5 85.5 1.0 O A:CYS945 3.5 98.1 1.0 HE1 A:HIS891 3.7 127.9 1.0 CA A:CYS945 3.7 78.5 1.0 CA A:CYS899 3.7 83.7 1.0 H A:HIS946 3.8 102.5 1.0 HH A:TYR688 3.8 91.6 1.0 CA A:HIS946 3.9 75.7 1.0 HA A:CYS899 3.9 100.4 1.0 HB2 A:CYS945 4.0 71.9 1.0 H A:CYS899 4.0 117.6 1.0 HA A:CYS945 4.1 94.2 1.0 NE2 A:HIS946 4.1 103.5 1.0 CD2 A:HIS946 4.1 87.6 1.0 HB2 A:HIS946 4.1 85.8 1.0 HA A:HIS946 4.1 90.8 1.0 CD2 A:HIS891 4.2 106.2 1.0 NE2 A:HIS891 4.4 112.2 1.0 N A:CYS899 4.4 98.0 1.0 OH A:TYR688 4.4 76.3 1.0 CA A:HIS891 4.6 121.8 1.0 HE3 A:TRP898 4.6 84.8 1.0 H A:HIS891 4.8 132.2 1.0 HG12 A:VAL997 4.8 84.4 1.0 C A:CYS899 4.8 88.5 1.0 HE2 A:HIS946 4.9 124.2 1.0 H A:HIS900 4.9 122.4 0.5 H A:HIS900 4.9 122.4 0.5 HD2 A:HIS946 5.0 105.1 1.0

M.Gonsior, B.M.Martins. Crystal Structure of LICM2 To Be Published.